Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2303 |
Symbol | holB |
ID | 3518620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2402386 |
End bp | 2403381 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284760 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_269023 |
Protein GI | 71278908 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0470] ATPase involved in DNA replication |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACAAA TTTGCCACGA AAAGCAAGTG CAATTGAGCC GACAATACCA ACAAGATACC TTAGCACATG CCATTATCAT TCAAGGTATA GAAGGTGCTG GGCAAGGTGC ATTGGCAAAG TGGTTAATTG AGTTGTTAAT ATGTCAAAAT CCGTTATCAA CAACTAATGC TGCTGGAACT GAAACCATCA GTGAAGCCTG TGGTCAATGT AAGGCCTGCC TGCTTAAGAA AAGTGATAAC TATCCAGACC ACTTATTGTT GAAGAGCGAG AATAAAACTT TAGGGGTTGA CGACATTCGT CGTGGCAATG CATTTCTAGA AAAGACTGCC CACCTAGGCA AGGTGAAAAC GATATTGATA CCACAAGCTC AGGTAATGAC TATTGCTGCA GCTAATGCAT TACTAAAAAC ATTAGAGGAG CCAAGTGCCA ATAGTTATAT TGTATTAATT ACAGACGATC TTGATAGCTT ATTACCGACA ATAATAAGTC GGTGTGCTGT TTATGCCATT AGACCTATGA TAGGCGAGGC CTTGTTGGCA CAACTCAAGG TATCGAACCT TGGCGATGTT CAACTATCAA GTAGTGCTCC TTTGACTAAT AAAGCTAATG ACACTGCTTA TATTAATTTA TCTCATTTAC CTGAATTAAC CGATAAAATT GTTCATCAAG AATTTCAGGT TTTTAATCAA TATTTATTAG ATTATTTACT ACATGGTCAA AGTGAAGAAA AGTTATTGAG TCAGATTGTT GATAATAAGT ACAGTTTACG TTGGTTAGAA AAAATAACCT GTAATCTAAT GAGAGAATAT TACCTTGTTA ATGCAACGGA TCAGACCTTA TTGCTTATTA AACAGAAAAT TTCAGTGCAA GTGCTTAATC AAATATATCA AGCTATCATC ACTAGTAATA AACTGATAAA ATCTTATCTT CAAGCTAATC GACAATTCGT CGGTGAACAG TTACTTATGA CGATAAATGA TATCGTTAGA CCATAG
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Protein sequence | MLQICHEKQV QLSRQYQQDT LAHAIIIQGI EGAGQGALAK WLIELLICQN PLSTTNAAGT ETISEACGQC KACLLKKSDN YPDHLLLKSE NKTLGVDDIR RGNAFLEKTA HLGKVKTILI PQAQVMTIAA ANALLKTLEE PSANSYIVLI TDDLDSLLPT IISRCAVYAI RPMIGEALLA QLKVSNLGDV QLSSSAPLTN KANDTAYINL SHLPELTDKI VHQEFQVFNQ YLLDYLLHGQ SEEKLLSQIV DNKYSLRWLE KITCNLMREY YLVNATDQTL LLIKQKISVQ VLNQIYQAII TSNKLIKSYL QANRQFVGEQ LLMTINDIVR P
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