| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2300 |
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| Symbol | pabC |
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| ID | 3519707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2399796 |
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| End bp | 2400602 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284757 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | YP_269020 |
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| Protein GI | 71278106 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.187606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATATT GCTCTATAAA TGGTCAACAA CAAACAGATA TAGCGGTAAC TGATAGGGGA
CTTGCTTACG GTGATGGGCT ATTTACCACA GCTAAAATTG TTAATGGCAC AGTGGTATTA
TTAGAAAAGC ATATCGAGCG ATTAACTCAT GGCTGTCAGC AATTAAAACT GCAGCTACCT
TCAAACATAA GTTTAAGAGA ACAATTGGCA TCGGTCGTCC AAGGATATTC GCTAGCGGTA
CTTAAAGTAA TGATAACTGC AGGTAGTGGT GGCAGAGGTT ACTCTAGAGT CGGACTCAGT
GATAATGCTG CAAACATAAT CATCATGATA TCTGATTTTC CAAGTCATTA TGAAACGCTC
GCTCAACAAG GAATCAATGT AGGAGATAGT AAATATCAGA TTGCGACTAG CTCAATGCTT
GGGGGGATTA AACATCTCAA TAGACTTGAG CAGGTATTAT TAAGAACTGA AGTTGATGAG
CGCAGCGAGG ATGATCTTAT TGTGACTAAT TGCCAAGGCG ATGTTATTGA GGCGACCAGC
TCAAATCTAT TCTATTGGTT GAATGAACAG TTATGCACCC CTGAAATATC AACCTCAGGA
GTTGATGGTA TTATGAGACA GGTGCTTATA GCCAAAAACA CAGAAATAAA AGTATGTAAA
ACCTCATTCG AAGAACTTAA ATACGCACAA GCTATGTTTA TCTCTAATTC TTTGATGGGC
ATAATGCCGG TAAAAACGTA CAATAATCGC CTACTTGACG TTGATGTTGT ATTGAAGCTT
CAAAGACGAA TGAAAGGATT TATTTAA
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| Protein sequence | MKYCSINGQQ QTDIAVTDRG LAYGDGLFTT AKIVNGTVVL LEKHIERLTH GCQQLKLQLP
SNISLREQLA SVVQGYSLAV LKVMITAGSG GRGYSRVGLS DNAANIIIMI SDFPSHYETL
AQQGINVGDS KYQIATSSML GGIKHLNRLE QVLLRTEVDE RSEDDLIVTN CQGDVIEATS
SNLFYWLNEQ LCTPEISTSG VDGIMRQVLI AKNTEIKVCK TSFEELKYAQ AMFISNSLMG
IMPVKTYNNR LLDVDVVLKL QRRMKGFI
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