Gene CPS_2283 details

Gene Information

• Locus tag: CPS_2283
• Symbol: edd
• ID: 3519580
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2382541
• End bp: 2384355
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637284740
• Product: phosphogluconate dehydratase
• Protein accession: YP_269003
• Protein GI: 71277941
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.348239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGC AAATAGTAGA TATTACCGAC AGAATTATAA AACGTAGTAC TAAAACTCGT 
GCTGCATATT TAGCAAAAAT TGATGCCGCA AAATCAGACA CAGTTCATCG TGCCGGTTTA 
TCATGTGGTA ACTTAGCACA CGGCTTTGCT GCTTGTGGAA AGGATGACAA GTCATCATTA 
CGCGGCATAA ATCATTCAGA TATCGCTATT GTTTCTGCTT ACAACGATAT GCTTAGTGCT 
CATCAGCCAT ATCAGACATA TCCAGACATA ATTAAAGCGG CAGTTAAAGA AGCTGGTGGC 
GTTGCACAAT TTGCTGCGGG TGTCCCTGCC ATGTGTGATG GTGTTACACA AGGCCAGCCG 
GGTATGGATT TAAGCTTGAT GAGCCGTGAT GTAATCGCAA TGTCAACGGC TGTTGGTTTA 
TCTCATAATA TGTTTGACGG TGCATTAATG TTAGGCATCT GCGATAAAAT AGTACCGGGC 
TTACTGATCG CAAGTATGAC ATTTGGTCAT TTACCGACGG TATTTATCCC AGCAGGTCCT 
ATGCCTTCAG GTCTGCCAAA CAAGGAAAAA GCTCGCGTTC GTCAGCAACA TGCTAAAGGC 
GAAGTGGACG AAGTCGCATT GCTTGAGGCT GAATCTGCGT CATATCACTC TGCAGGTACT 
TGTACTTTCT TTGGCACCGC AAACTCCAAT CAGTTAGTGG TTGAAGTCAT GGGCTTACAT 
TTACCTGGTG CATCTTTTAT TGCCCCTAAT ACACAACTTC GTGAAGAATT AACAAAAGCT 
GCTGCTCGTC AAGCGACTCG TTTAACGCAA CAATCGGGTA ACTATCTGCC GATTGGGAAA 
ATGGTTGATG AACGCTCGGT AGTTAATGCT ATTGTAGCGT TACTTGCGAC AGGCGGTTCA 
ACTAACCTGA CTATGCATAT AATTGCTTTT GCTAAAGCGG CAGGCATTAT TATTAACTTC 
CAAGACTTTA ATGATCTTTC TGAAGCTGTT CCATTATTAA CACGCATATA CCCTAACGGC 
CATGCGGATA TAAACCAATT TCAAGAAGCT GGCGGCATGG CGTTATTATT CCGAGAACTT 
ATTGAAGGTG GGCTAGTATA CGAAGATGTA GAAACTATCT GTGGTCGCGG TTTAACTCGA 
TACACCAAAA AACCTGTTTT AGACAATGGT GAGCTTAAGT GGGTTGATTG CGTAGAAAAG 
TCACTTGATG ATGAAATTAT TGCAACCGTT GCTAAGCCAT TTAGTTCTCA TGGTGGTTTA 
CGAGTAATGA AAGGTAATTT AGGTGTTTCG GTTATTAAAA CGTCATCACT TCGAGAAGGT 
AGCTTTGTCA TTAAAGCACC TGCTGTTGTT TTTGAAGACC AACATGAATT ACAGACTGCA 
TTTGACGCAG GTGAGCTAGA AAAAGATTTT GTTGCCGTAG TAAGGTTCCA AGGCCCTAAA 
GCTCGTGGCA TGCCTGAATT ACACAAATTA ACGCCATTGT TAGGCGTACT TCAAGACAAA 
GGCTTTAAAG TTGCTCTCGT TACTGACGGA CGTATGTCTG GCGCTTCAGG TAAGGTGCCT 
GCAGCCATTC ATTTATGCCC TGAAGCACTC GATGGTGGTT TAATTGCTAA AGTTAAAAGT 
GGCGACATGA TCAATGTAGA TGGCGAAACT GGCGAACTTA CTCTATTAGT TGATGAAAAA 
GAATTAGCTT CACGTGAAGT TGCTCAGTTT CAAGTAAATG GTCATCATGA AGGTATGGGC 
CGTGAGCTAT TTGGCTTTAT GCGTCGTAAT TTGAGTTCAG CTGAAACAGG TGCGTGTTCG 
TTATTCGATT CATAA 

 

Protein sequence

MKQQIVDITD RIIKRSTKTR AAYLAKIDAA KSDTVHRAGL SCGNLAHGFA ACGKDDKSSL 
RGINHSDIAI VSAYNDMLSA HQPYQTYPDI IKAAVKEAGG VAQFAAGVPA MCDGVTQGQP 
GMDLSLMSRD VIAMSTAVGL SHNMFDGALM LGICDKIVPG LLIASMTFGH LPTVFIPAGP 
MPSGLPNKEK ARVRQQHAKG EVDEVALLEA ESASYHSAGT CTFFGTANSN QLVVEVMGLH 
LPGASFIAPN TQLREELTKA AARQATRLTQ QSGNYLPIGK MVDERSVVNA IVALLATGGS 
TNLTMHIIAF AKAAGIIINF QDFNDLSEAV PLLTRIYPNG HADINQFQEA GGMALLFREL 
IEGGLVYEDV ETICGRGLTR YTKKPVLDNG ELKWVDCVEK SLDDEIIATV AKPFSSHGGL 
RVMKGNLGVS VIKTSSLREG SFVIKAPAVV FEDQHELQTA FDAGELEKDF VAVVRFQGPK 
ARGMPELHKL TPLLGVLQDK GFKVALVTDG RMSGASGKVP AAIHLCPEAL DGGLIAKVKS 
GDMINVDGET GELTLLVDEK ELASREVAQF QVNGHHEGMG RELFGFMRRN LSSAETGACS 
LFDS