| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2274 |
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| Symbol | metC |
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| ID | 3518756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2372180 |
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| End bp | 2373361 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284731 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_268994 |
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| Protein GI | 71278617 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAAG ATACTAAAAT AGTAAATGCT GGACGTAGTG CTAAATGGAC TAATGGGGTT
GTTAACCCTG CGGTAACACG CGCATCTACC GTGGTATTTA ATACTGTCGC AGAGATGAAT
AATGCTGTGG CCAACCGACA TAATCAAACC ATGGTGTATG GTCGTCGAGG TACTACGACT
TCTTTTGCTT TTAGCGATGC TATGACTGAG TTAGAAGGCG GAGCAGGTTG TGCTTTATAT
CCTTCAGGTA CTGCAGCTAT TACCAATGCT ATTTTAGCTT TCGTTAAGCA AGGTGACCAC
ATCTTAATGG TTGATAGTGC TTATGAGCCT ACGCGTGATT ATTGCGATAA AATATTAGCT
AAAATGGGTG TTAGTACCAC CTATTATGAT CCTATGGTTG GTGCTGATAT TGAAGCATTG
ATTCAAGATA ACACCTGTCT AATTTTCTTA GAGTCACCAG GCTCTATTAC CATGGAAGTA
CAAGATGTTC CTACTATTAG CGCTATAGCA CATAAGCATG ATTGTATCGT TATGCTTGAT
AATACTTGGG GCGCAGGTAT TAACTTCAAG CCGTTTGATT ATGGTGTTGA TGTAAGTATA
CAAGCAGCAA CCAAATATAT TGTTGGTCAT TCTGATGTAA TGTTAGGCAC AGCGACAGCG
GTAGAAAAAT ATTGGCCTCA ACTGAGAGAT TACAGTTATT TGATGGGACA ATGTACCTCT
CCTGATGATC TATACCTAGC ACTTCGGGGC ATTCGTACTC TTGGGATAAG ATTAAAACAG
CACCAAAAAA GTGCAACTAA GGTAGCTCAA TGGTTACAAG AACGTCCAGA GGTCGCTAAA
ATATTACACC CCGCGTTTGA GTCATGTCCA GGTCATGAAT TTTTCAAACG AGATTTTGAA
GGCTCTAATG GTTTATTTTC TTTTGTACTT AACTGCGGTA ATAAAGAAGC ATTAACAGCA
TTTTTAGATG GTTTACATCA TTTTAAAATG GGTTACTCAT GGGGAGGTTT TGAAAGTTTA
ATTTTAGGTA TCACTAATGT AAACGCTATT CGAAGTGCGA CTACATTTGA TTGTGAGTTT
CCGCTAATTA GACTACATAT CGGTTTGGAA GATGTAGACG ATTTAATTGA AGATTTATCG
AAAGGATTTG AGCGTTTTAA TCAAGTACTT GCCAATTCAT AG
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| Protein sequence | MKQDTKIVNA GRSAKWTNGV VNPAVTRAST VVFNTVAEMN NAVANRHNQT MVYGRRGTTT
SFAFSDAMTE LEGGAGCALY PSGTAAITNA ILAFVKQGDH ILMVDSAYEP TRDYCDKILA
KMGVSTTYYD PMVGADIEAL IQDNTCLIFL ESPGSITMEV QDVPTISAIA HKHDCIVMLD
NTWGAGINFK PFDYGVDVSI QAATKYIVGH SDVMLGTATA VEKYWPQLRD YSYLMGQCTS
PDDLYLALRG IRTLGIRLKQ HQKSATKVAQ WLQERPEVAK ILHPAFESCP GHEFFKRDFE
GSNGLFSFVL NCGNKEALTA FLDGLHHFKM GYSWGGFESL ILGITNVNAI RSATTFDCEF
PLIRLHIGLE DVDDLIEDLS KGFERFNQVL ANS
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