| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2265 |
|---|
| Symbol | fadE |
|---|
| ID | 3518718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2360115 |
|---|
| End bp | 2362544 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637284722 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_268985 |
|---|
| Protein GI | 71278657 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.105955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATATTA TTATTTGGTT AATCGTCGCG CTAACCCTAA CTTGGTTTAT GAGCTATACA
AGGGCATCAT TATCAAGTTT TACCTTATGT TTTGCCGCTC TAATGGCGTT AGGGTCTTTA
TTTAACATAA TCGGCATAGT TTCTTGGTTA CTTTTTGCTG TCATAGCCTT GCCGATAAAT
ATTGATAATA TTCGTCAGCA GTTTATTAGT ATGCCTTTAT TGGCTATTTT TAAAAAAATA
ATGCCGCAAA TGTCTTCGAC AGAACAAGAA GCTATCGATG CTGGCACCAC CTGGTTCGAT
GCAGATTTAT TTCGTGGTGA CCCTGACTGG CTGAAACTTC ACAATTACCC TCGCCCTAGA
CTGAGTTCAC AAGAAAAAGC CTTCTTAGAT GGGCCTGTTG AACAAGTTTG TGCCATGGTT
AACGATTGGC ATATTACCCA TGAAATTGCT GATCTTCCAC CAGAAATATG GCAGTTCTTA
AAAGAAAATA AATTTTTTGC CATGATTATT AAAAAACAAT ATGGTGGATT AGAATTTTCA
GCTTATGCTC AATCTAGAGT ATTACAAAAA CTCACCGGCG TGAGCTCGGT TCTTGCCAGC
ACGGTCGGTG TTCCAAACTC TTTAGGTCCT GGTGAATTAT TACAGGAATA CGGTACAAAA
GAACAGCAGG ATTACTACTT ACCTCGCCTA GCGAAAGGTG AAGAAATACC TTGTTTTGCG
CTAACAAGTC CTGAGGCAGG ATCCGATGCA GGATCTATCC CTGATTATGG TGTTATATGT
CATGGGCAAT TTAACGGAGA AGATGTTTTA GGAATGAAGT TGACGTGGGA TAAACGTTAC
ATCACCCTTG CCCCTATCGC TACAGTGCTA GGATTAGCCT TTAAATTACA AGACCCCGAT
AATCTTCTAT CTGAGCAAGA AGACTTAGGT ATTACTTGTG CACTTATCCC AACTGATATT
GAAGGAATAA CGATTGGTCG TAGGCATTTT CCCCTAAACG TTCCTTTTCA AAATGGACCA
ACCCAAGGGA AAGATGTTTT TGTCCCACTA GATTTTATAA TCGGTGGTTC AGACATGGCA
GGACAAGGTT GGCGTATGTT AGTGGAGTGT TTATCTGTTG GGCGCGCAAT TACATTGCCT
TCTAATAGCA CGGGCGGTGT TAAAACCGCA GCGTTAGCTA CAGGTGCATA TAGCCGCATA
AGACGGCAGT TTAAGATGCC AATAGGTAAA ATGGAGGGTA TTGAAGAGCC ACTTGCCCGT
ATCGGTGCTA ATGCCTATTT AATGGACGCT GTCACAACGA TGTCAACGGG TGCCATCGAC
TTGGGAGAAA AACCTTCTGT TATTTCAGCC ATAGCTAAAT ACCATCTTAC TGAAAAAATG
CGCTCTTCTA TTATTGATGC GATGGATATT CATGGCGGAA AAGGTATTTG TATGGGACCG
AATAATTACC TAGCGCGTGG TTATCAAGGC GCACCTATTG CTGTGACGGT TGAAGGAGCC
AATATTCTTA CTCGCAGTAT GATAATTTAT GGTCAAGGTG CTATTCGTTG CCACCCATAC
GTATTAGCAG AATTAGAAGC AGCAAATAAT AGTGATAATG AACAAGCGCT CAATGATTTT
GACCATGCCC TTTTTGGTCA TATAGGTTTT AGTCTCAGTA ACATTAGCCG TAGTTTATGG
TGCTCAATTA CCGGTTCACG TTTCTTAGGC AGTCCATATG ATGATGGGAC ACGCCGCTAT
TATCAATTAC TGACACGTTT TAGTGCCAAT TTAGCCATGC TTTCAGATAT TTCTATGTTA
TCACTTGGTG CAGATTTAAA ACGTAAAGAG CGAATTTCAG CAAGGTTAGG TGATGTACTA
AGTCAACTGT ATTTAGCGAG CGCGACCTTG AAACGCTATA ATGATGAAGG AAGAAATACT
GCTGACCTTC CTCTAGTACA ATGGGCTGTA GAGGATTGTC TCTACAATAT CCAACATGCT
ATTGATGAGT TGATTAGTAA TTTTCCTAAC AAAATTGTTG GAAAATTATT ACGCGTGATC
ATCTTCCCTC TAGGTACTTG GTTAAAAAAA CCTAACGATG AAACATCACA TAAAGTTGCA
CAATTATTAC AAACCCCTGG CTCCGCACGT ACTCGATTAG GTCAAGGACA ATACCTAACC
CGTGATGGCA ACAATATTTT TGGCAGGTTA GAACAAGTAC TTGAAGACAT CATTAGTTGC
GAGCCTATTT ATGAAAAAGT ATGCCGAGAA TTAAATAAAA AACTACCTTT TTATCACCTA
GATAAAGTAG CTGAGCTCGG ACTTACTAAT AACATTATTT CAAAAGTAGA GGCTGAATTA
TTAACAACGG CCGAGGTTGG GCGTCAGTGG GTAATTGCCG TTGATGATTT TGATAGTAAA
GACATGACGG CATTTTCAGG TTCTGCATAG
|
|---|
| Protein sequence | MDIIIWLIVA LTLTWFMSYT RASLSSFTLC FAALMALGSL FNIIGIVSWL LFAVIALPIN
IDNIRQQFIS MPLLAIFKKI MPQMSSTEQE AIDAGTTWFD ADLFRGDPDW LKLHNYPRPR
LSSQEKAFLD GPVEQVCAMV NDWHITHEIA DLPPEIWQFL KENKFFAMII KKQYGGLEFS
AYAQSRVLQK LTGVSSVLAS TVGVPNSLGP GELLQEYGTK EQQDYYLPRL AKGEEIPCFA
LTSPEAGSDA GSIPDYGVIC HGQFNGEDVL GMKLTWDKRY ITLAPIATVL GLAFKLQDPD
NLLSEQEDLG ITCALIPTDI EGITIGRRHF PLNVPFQNGP TQGKDVFVPL DFIIGGSDMA
GQGWRMLVEC LSVGRAITLP SNSTGGVKTA ALATGAYSRI RRQFKMPIGK MEGIEEPLAR
IGANAYLMDA VTTMSTGAID LGEKPSVISA IAKYHLTEKM RSSIIDAMDI HGGKGICMGP
NNYLARGYQG APIAVTVEGA NILTRSMIIY GQGAIRCHPY VLAELEAANN SDNEQALNDF
DHALFGHIGF SLSNISRSLW CSITGSRFLG SPYDDGTRRY YQLLTRFSAN LAMLSDISML
SLGADLKRKE RISARLGDVL SQLYLASATL KRYNDEGRNT ADLPLVQWAV EDCLYNIQHA
IDELISNFPN KIVGKLLRVI IFPLGTWLKK PNDETSHKVA QLLQTPGSAR TRLGQGQYLT
RDGNNIFGRL EQVLEDIISC EPIYEKVCRE LNKKLPFYHL DKVAELGLTN NIISKVEAEL
LTTAEVGRQW VIAVDDFDSK DMTAFSGSA
|
|---|
| |