| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2263 |
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| Symbol | |
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| ID | 3522984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2357301 |
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| End bp | 2359121 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284720 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | YP_268983 |
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| Protein GI | 71282509 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGTT ATAAAGCACC GATAGCCGAT ATTAAATTTT TGATTGAAGA TGTTTTCAAT
TATTATGATC ATTATAAAAA ATATGAAGAA TTTGAAGAAG CCAGTCCTGA TTTAGTTGAT
GCAATTCTAC AAGAGTGTGC AAAATTCTGT GAAAATGAAC TACTGCCTTT ATACCAAAGT
GGTGATAAAG AGGGTTGTCA GTTTGATAAT GGCAAAGTAA TTACACCAAA GGGCTTTAAA
GAAGCTTATC AGCAATATGT TGATGGAGGA TGGTCTTCAT TATCACACCC ATTAGAGCAT
GGTGGCCAAG GGTTACCACC TTCATTAGGT TTAGTTCAAT CAGAAATGAC TGGTACAGCC
AATTGGTCTT GGGCAATGTA CCCAGGTCTT AGTCATGGGG CAATGAATAC TATCGATGCA
CATGGTAATG ATAAGCAAAA AGAGCTGTAT TTAACGCGCT TAATTCAAGG TACTTGGACA
GGTACTATGT GTTTAACTGA GCCTCAATGT GGTACTGATT TGGGACAAGT TAAAACGAAA
GCAGAACCCA ATGGCGATGG TACTTACAAT ATTACCGGTA CAAAAATATT TATTTCTGCG
GGTGAGCATG ACTTAACCGA TAATATTATC CATATCGTAT TAGCAAGATT ACCCGATGCA
CCAAAAGGTA CACGTGGTAT ATCTTTATTT ATCGTACCTA AAGTAAAAGC TAGTCAAGAT
GGTACCTTAG GTGATTTTAA TAATGTTACC TGTGGCTCGA TAGAAGATAA AATGGGTATT
AAAGCGTCTG CGACAGCGGT GCTTAATTTT GATAATGCAG TAGGTGAGCT GATAGGTCCA
GAAAATAAAG GCTTAGAATG TATGTTCACC TTTATGAATA CAGCACGACT TGGTACAGCG
TTACAAGGCG TTTGTTCAGC AGAACTTGCT TTCCAAAACT CTTTGATTTA TGCCAAAGAG
CGTTTATCAA TGCGCTCTTT AACTGGTAAA AAATTTCCTG AACAAGTTGC TGACCCAATT
ATTGTTCACC CAGATGTTCG TAAAATGTTG ATGACTCAGA AAGCGATTTC AGAAGGCGGT
AGGGCAATGA TTTATTACAC TGCCAAAATC GTTGATGATA TTTCTATGGC AAAAACAGAA
GAAGAGCGTC TAGCGGCAGA TGATCGTTTA GGCTTTATAA CTCCTATATT AAAAGCATTT
CTAACTGAGC TTGGCTCTGA AAGTGCTAAT CACGGTTTAC AAATATTTGG TGGTCACGGT
TATATAAAAG AGTGGGGCAT GGAGCAAATA GTGCGAGATG TAAGAATCTC TACACTGTAT
GAAGGAACTA CAGGGATACA AGCACTAGAT TTATTAGGCC GCAAGATATT AATGACACGC
GGTAAGTCTT TAAATGACTT CTCTAAAGAA GTGCTTGGTT TTTGTAAAGA TAATAGCTTA
ATTTCGAGTA ACCCACATAA ACGTCAAATG AATCGCTTTA TTTGGCCGTT AAGTAAGTCT
ATTGCTAATT GGCAGCAGTA CTCAGTACGC CTAGGACTTA AAGCTAAGTC TGATAGAGAC
ATTGTTGGCT CAGCTTCAGT TGATTTCCTA ATGTATTCTG GTTATGTCGT TATGGGATAT
TTTTGGGCTC AAATGGCACA ATCAGCCTAT GAAAAATTAG CTGGTGATGT TGAAAACCGT
GACTTTTATC GTGCGAAAAT TAAAACGGCT GAATTCTATT TTGAACGTAT ATTACCTAGA
ACAAAATCTT TAGCAAAAAC TATGATGGTT GATCCAAAAA GCTTAATGCA ACTGGACCAA
GAGCTAATGT CTTTTCTTTA A
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| Protein sequence | MLSYKAPIAD IKFLIEDVFN YYDHYKKYEE FEEASPDLVD AILQECAKFC ENELLPLYQS
GDKEGCQFDN GKVITPKGFK EAYQQYVDGG WSSLSHPLEH GGQGLPPSLG LVQSEMTGTA
NWSWAMYPGL SHGAMNTIDA HGNDKQKELY LTRLIQGTWT GTMCLTEPQC GTDLGQVKTK
AEPNGDGTYN ITGTKIFISA GEHDLTDNII HIVLARLPDA PKGTRGISLF IVPKVKASQD
GTLGDFNNVT CGSIEDKMGI KASATAVLNF DNAVGELIGP ENKGLECMFT FMNTARLGTA
LQGVCSAELA FQNSLIYAKE RLSMRSLTGK KFPEQVADPI IVHPDVRKML MTQKAISEGG
RAMIYYTAKI VDDISMAKTE EERLAADDRL GFITPILKAF LTELGSESAN HGLQIFGGHG
YIKEWGMEQI VRDVRISTLY EGTTGIQALD LLGRKILMTR GKSLNDFSKE VLGFCKDNSL
ISSNPHKRQM NRFIWPLSKS IANWQQYSVR LGLKAKSDRD IVGSASVDFL MYSGYVVMGY
FWAQMAQSAY EKLAGDVENR DFYRAKIKTA EFYFERILPR TKSLAKTMMV DPKSLMQLDQ
ELMSFL
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