Gene CPS_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2243 
Symbol 
ID3518699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2343055 
End bp2347182 
Gene Length4128 bp 
Protein Length1375 aa 
Translation table11 
GC content38% 
IMG OID637284700 
ProductATP-dependent helicase HrpA 
Protein accessionYP_268968 
Protein GI71278677 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01967] ATP-dependent helicase HrpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGTTT CGATTAAGTC TGTTATTACT TCATTTTCCC ATTTACAAAA ACTTTTTGAA 
TTATTGCCAC AAGCAAAAAA AAGCGATGCT GTACGCTTTA GAAAAAGGTT AATAAATCTG
AAAAAAACGA TTACTAAAGA GGTTGGACAA AAATCACCGA CTGAATTGGC GATGCTATCA
TTATCAGAAA AGCACATTAA GTTGGTCGAA CCGTTACAAC AACATATCCT CAGATCTATT
CAAGATAAAC AACAAAAAAT CAGAAGTTTA CCTAAAATAA CGTATCCCGA AGGTTTACCC
ATTTCAGAGA ATGCTGCGCA AATTTCAGCA GCTATTGATG CTAATCAAGT GGTTATCATT
GCGGGTGAAA CAGGATCTGG AAAAACTACA CAAATTCCCA AGATTTGTCT TGAACTTGGT
CGAGGTGTGG ATGGTCTTAT TGGTCACACT CAACCTAGAC GTATTGCCGC TAGAACCGTT
GCTAATCGTA TTGCGGAAGA GTTAGGCACT AAGTTAGGTG AGCAAGTAGG TTATAAGGTT
CGTTTTAATG ACCAAGTCAG CGAGCAAAGT TATATCAAAT TGATGACTGA CGGTATTTTG
CTGGCGGAAA TGCAAAGGGA TAGATTACTT CTTAAATACG ACACAATTAT CATCGATGAA
GCCCATGAGC GTAGTTTAAA TATCGATTTT ATTTTGGGCT ATTTAAAGCA AATACTAATA
AAACGACCTG ATCTAAAGTT AATCATTACC TCAGCGACCA TTGACCCACA ACGTTTTGCG
AAACATTTCT CTAGTAAGAA TGGCTTACCA GCACCTATTA TTGAAGTATC AGGAAGAACA
TTCCCTGTTG AAATGCGCTA TCGACCATTA AATGATCGTG CAGTGATTGA TGATGACGAC
CAATCACCGC AAGAAGTTGA TATTATCAGT GGTATTTTGT CGGCGGTTGA TGAGCTAAGT
GACTGCGGTA ATGGTGACAT TCTGGTTTTC CTCAATGGTG AACGGGAAAT ACGCGATACT
GCTGCTGCGC TAGTTAAAGC TAATTTACGT CATACTAATG TTTTGCCTCT GTATGCTCGT
TTAACGGTTA GTGAGCAGAA TCAAATATTT AAACCCCACA GTGGACGAAA TATTGTATTG
GCAACCAACG TTGCTGAAAC GAGCTTAACA GTACCAGGTA TCAAGTATGT GATTGATCCG
GGAACGGCAC GTATTTCACG TTACAGTTAC CGAACTAAAG TACAACGTTT GCCTATTGAA
CCAGTTTCAC AGGCAAGTGC TAATCAACGC TCTGGCCGTT GTGGACGTGT TTCTGAAGGT
ATCTGTATTC GTTTATATTC AGAAGATGAT TATAAAAGTC GTGCTGAATT TACAGACCCT
GAAATTTTAC GTACCAATTT AGCAACCGTC ATATTGCAAA TGCATGCGCT GGATTTAGGT
GATATTGCTA ATTTTCCGTT TGTTGAAGCC CCTGATAATC GTAATATCAC TGACGGTGTT
CGTTTATTGG AAGAAATTGC TGCGGTTGAA AGCATAGAAA ACGCGGATAA AAACGCTAAG
GGTAAAGCTT CGTCAACGGC GACACAGTTG ACGAAATCAG GCCGTCTATT AGCAAAGTTC
CCTATAGATC CTCGTTTGGC AAAAATGGTC GTCTCTTCCA TAGAATTTGG TTGTATCGAA
CAAATACTGA TTATTGTTAG TGCATTAAGT ATTCAAGATC CACGAGAAAG ACCGCATGAG
AAACAACAGC TGAGTGATGA AAAGCATAAC CGATTTAAAG ATAAGTCATC TGATTTTATA
AGCTTACTTA ATCTTTGGCA GTATATTAAC GAGCAGAAAA AAGACTTAAC GCAAAATCAG
TTTAGGAAGT TATGTCAGCG CGAGTTTCTT TCTTATGTTC GTTTACGTGA ATGGCAAGAT
ATTTTCAGTC AATTAAAACT AACGTTAAAA GAACAGCAAA TAACGTTAAC GTCGATTGAT
TATCAGTTTT CTATGCCGAA TGTTCAGCAG GGTCAAGCAG CAAGCACAGC AGTAGATAAG
ACAAAAGAGA CAGAGCAAGA CTCAGCGTTA ACTCCTGTAC ATCAAGCATT GTTGTCAGGT
TTACTTAGTC ATATCGGTCA ACAGGATGAA AACCGCGAGT ATAAAGGAGC TCGGGGAATG
AAGTTTTTTA TCTTTCCAGG CTCAGCGCTA ACTAAAAAAT CACCAAAATG GTTAATGTCT
GCGGAGCTAG TAGAAACCAG TCGATTGTTT GCTCGTATGA ATGCCAAGAT TGACCCTTTG
TGGCTGGAAC CGCTTGCTCA GCATTTAGTT AAGCGAAATT ACAGTGAACC TCATTGGGAG
AAAAAACAAG GTGCTGTAAT GGCCTTTGAG CAAGTAACAT TGTATGGCTT AAGTATTGTT
AGTAAACGTA AGATCAATTT TAATGTCATT GAACCGGTTA CTTGTCGTGA AATATTTATT
CGTGAAGCAT TGGTCAATGG TGACTGCGTC ATTAAAGAAA AGTTTTTAAG CAAAAACCAG
CAATTGGTCG AAAGCATAGA AGAGCTTGAA CAAAAAGCAC GTCGCAGAGA CTTTTTAATT
GATGAACAGC ATTTAGTTGA TTTTTACAGT GATAAACTTC CTGATACTGT TAACTGTCAA
CGTAGCTTCC TCGCTTGGTG GAAAAAAGCT AAACGTGAGA ACGAACAGTT ATTAGATTTT
AGCAAAGCCT TTTTATTGAA TGAGTCTTCG GATGAATTAA GTACTATTGA GTACCCTGAC
GTTTGGCAAC AAGATAGTAT TACCCTACCG CTAACATATC ATTTTAGTCC TGGTGATATT
GATGATGGCA TCAGTGTTGT ATTGCCGATT GCCTTATTAA ATCAAGTGCA AGAGGTTGGG
TTTGATTGGC TGATCCCTGC ACTGCGAGAT GAGCTTGCCA TCGCACTAAT TAAAGCTTTG
CCTAAAACAT TAAGACGTAA TTTTGTTCCC GCACCTAATT ATGCACAAGC TTGTTTAGCA
GCTATGCCTG CTGAGCAGGG ACATTTACAA GATGCGCTAG CAAAACAATT GTTACGAATG
ACTGGGGTAC GATTACCTGA AGATGCTTGG CAGGATATTA CCTTACCAAT TCACTTAACC
ATGAATTTTC AAGTAGTCGA TGACAAAGGG AAGTTAATAA AGCAAGGCAG AGACCTCAAC
GAACTTAAAG CTGAACTGCA AGGTAAAGTA AAAGCATCGA TTAAACAGGT TGCAGAAAAG
GGCATTGAGC AAGCTGATTT AACGAAATGG GATTTTGGTT CACTACCTAA AGGTTATGAA
AAGAAAGTTG CCAACATCAC TATTAAGGCA TTTCCTGCAT TGGTTGATCA TAAAAATAGT
GTTGCTATCG AGCTTTTTGA GCAAGAACAA CATGCCCAAG AAGCTATGCT GAAAGGGATT
AGCCGACTTA TCTTATTGAA TATCCCAACA CCATTAAAAT ATTTACAGGA AAAACTACCG
AATAAAGCCA AATTGGGTTT GTACTTTAAT CCTTTTGGTT CAATCAATGA GTTATTACAA
GACTGTATTC AAGGTGCTTG TTTGTCTTTG GTTCAACAAT TTTCTCAACA CCAAAATAAT
GGACTGCTTC CTAGGGAAGA AAAGCAATTT GCGAAGTGTT GTGATTATGT TAGAGCTGAA
ATAGCCGATT GTGTGTTAAC TGCAGCCATT AAAGTCGAGC GTGCATTAAC GTTGCGTCAT
GAAGTGACTA AAAAAATGAA AGGCAGTGTG CCTTTAAATG TTATTCAATC TCATGGTGAT
ATAAAACAAC AATGCGAGCA GTTAGTATTC AAAGGGTTTG TAACTTACTC AGGTTTGAGC
AAACTAGATG ATATTATTCG ATATTTACAA GGCATGTTAC GCCGTTTAGA AAAACTGCCA
AGTGACCCTA ATCAAGATAG ATTAAAGCTT ATTGAGGTAT CTAAAGTTAA CGATATGTAT
CAAGTGATTA TGAGCAAGCA ACGTAAGGAT AAACCAGTAG ACAATGAGTT ACTGGCTACC
CGATGGTTGA TTGAAGAGCT AAGGATTTCA TTGTTTGCAC AAAATTTAGG TACCTCAGCG
CCAATATCAG TTAAGCGTAT TTTAAATTAT TTAAAAGGTT TTTCTTAA
 
Protein sequence
MSVSIKSVIT SFSHLQKLFE LLPQAKKSDA VRFRKRLINL KKTITKEVGQ KSPTELAMLS 
LSEKHIKLVE PLQQHILRSI QDKQQKIRSL PKITYPEGLP ISENAAQISA AIDANQVVII
AGETGSGKTT QIPKICLELG RGVDGLIGHT QPRRIAARTV ANRIAEELGT KLGEQVGYKV
RFNDQVSEQS YIKLMTDGIL LAEMQRDRLL LKYDTIIIDE AHERSLNIDF ILGYLKQILI
KRPDLKLIIT SATIDPQRFA KHFSSKNGLP APIIEVSGRT FPVEMRYRPL NDRAVIDDDD
QSPQEVDIIS GILSAVDELS DCGNGDILVF LNGEREIRDT AAALVKANLR HTNVLPLYAR
LTVSEQNQIF KPHSGRNIVL ATNVAETSLT VPGIKYVIDP GTARISRYSY RTKVQRLPIE
PVSQASANQR SGRCGRVSEG ICIRLYSEDD YKSRAEFTDP EILRTNLATV ILQMHALDLG
DIANFPFVEA PDNRNITDGV RLLEEIAAVE SIENADKNAK GKASSTATQL TKSGRLLAKF
PIDPRLAKMV VSSIEFGCIE QILIIVSALS IQDPRERPHE KQQLSDEKHN RFKDKSSDFI
SLLNLWQYIN EQKKDLTQNQ FRKLCQREFL SYVRLREWQD IFSQLKLTLK EQQITLTSID
YQFSMPNVQQ GQAASTAVDK TKETEQDSAL TPVHQALLSG LLSHIGQQDE NREYKGARGM
KFFIFPGSAL TKKSPKWLMS AELVETSRLF ARMNAKIDPL WLEPLAQHLV KRNYSEPHWE
KKQGAVMAFE QVTLYGLSIV SKRKINFNVI EPVTCREIFI REALVNGDCV IKEKFLSKNQ
QLVESIEELE QKARRRDFLI DEQHLVDFYS DKLPDTVNCQ RSFLAWWKKA KRENEQLLDF
SKAFLLNESS DELSTIEYPD VWQQDSITLP LTYHFSPGDI DDGISVVLPI ALLNQVQEVG
FDWLIPALRD ELAIALIKAL PKTLRRNFVP APNYAQACLA AMPAEQGHLQ DALAKQLLRM
TGVRLPEDAW QDITLPIHLT MNFQVVDDKG KLIKQGRDLN ELKAELQGKV KASIKQVAEK
GIEQADLTKW DFGSLPKGYE KKVANITIKA FPALVDHKNS VAIELFEQEQ HAQEAMLKGI
SRLILLNIPT PLKYLQEKLP NKAKLGLYFN PFGSINELLQ DCIQGACLSL VQQFSQHQNN
GLLPREEKQF AKCCDYVRAE IADCVLTAAI KVERALTLRH EVTKKMKGSV PLNVIQSHGD
IKQQCEQLVF KGFVTYSGLS KLDDIIRYLQ GMLRRLEKLP SDPNQDRLKL IEVSKVNDMY
QVIMSKQRKD KPVDNELLAT RWLIEELRIS LFAQNLGTSA PISVKRILNY LKGFS