Gene CPS_2221 details

Gene Information

• Locus tag: CPS_2221
• Symbol: sucC
• ID: 3522165
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2324157
• End bp: 2325323
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637284678
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_268946
• Protein GI: 71281693
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0353826
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGC ATGAATACCA AGCGAAACAA TTGTTCGCTG AATACGGTTT ACCAGTTTCT 
GAAGGTTTCG CTTGCGATAC ACCTCAAGAA GCTGCCGAAG CGGCTGATAA AATTGGCGGC 
GATATGTGGG TTGTTAAAAC TCAAGTACAC GCAGGCGGAC GTGGTAAGGC TGGCGGTGTT 
AAGCTAGTTA AATCAAAAGA AGAAATCAAA GAGTTTGCTC AACACTGGTT AGGTAAGAAC 
TTAGTTACTT ACCAAACAGA TGCAAACGGA CAGCCAGTAG CTAAAATTTT AGTTGAAAGC 
TGTACTGATA TCGCCAACGA ATTATATCTT GGTGCTGTTG TTGATAGAGC TTCTCAAAGA 
GTTGTTTTCA TGGCATCTAC TGAAGGCGGT GTTGACATTG AAAAGATCGC AGAAGAGACT 
CCAGAATTAA TTCACCAAGC TGAGATTGAT CCACTAGTTG GCGCTCAACC TTACCAAGCA 
CGTGAATTAG GTTTTAAACT TGGTTTAAAC CCTACGCAAA TGAAGCAATT TGTTAAGATC 
TTTATGGGTC TTGCTAAAAT GTTTGAAGAT TGTGATTTCG CCTTATTAGA AATCAACCCG 
TTAGTTATTA CTGACGAAGG CAACCTTCAT TGTTTAGACG GCAAAATTGG TATCGATGGT 
AATGCTATTT ACCGTCAACC TAAAATGCGC GCTTTCCACG ATCCATCTCA AGAAGATGAA 
CGTGAAGCAC ATGCAGCACA ATGGGAGCTT AACTATGTAG CTCTTGATGG TACTGTTGGT 
TGTATGGTTA ACGGTGCAGG CCTAGCAATG GGTACTATGG ATATCGTTAA TTTACACGGC 
GGCAAGCCAG CTAACTTCCT AGATGTTGGC GGCGGAGCAA ACAAAGAACG TGTTTCTGAA 
GCATTCAAAA TCATCCTTTC TGACGATAAC GTTAAAGCTG TTTTAGTTAA CATCTTTGGT 
GGCATTGTTC GTTGTGACAT GATTGCTGAA GGTATTATTG GCGCTGTTAA AGAAGTAGGC 
GTTAAAGTAC CAGTTGTTGT ACGTTTAGAA GGTACTAATG CTGAATTAGG TCGTGAAGTT 
CTTAAAAACT CTGGCTTAGA CATCATTGCT GCTGAATCAC TAACTGATGC AGCAACTAAA 
GTTGTAGCAG CTGCGGAGGG CAAATAA 

 

Protein sequence

MNLHEYQAKQ LFAEYGLPVS EGFACDTPQE AAEAADKIGG DMWVVKTQVH AGGRGKAGGV 
KLVKSKEEIK EFAQHWLGKN LVTYQTDANG QPVAKILVES CTDIANELYL GAVVDRASQR 
VVFMASTEGG VDIEKIAEET PELIHQAEID PLVGAQPYQA RELGFKLGLN PTQMKQFVKI 
FMGLAKMFED CDFALLEINP LVITDEGNLH CLDGKIGIDG NAIYRQPKMR AFHDPSQEDE 
REAHAAQWEL NYVALDGTVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGANKERVSE 
AFKIILSDDN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV 
LKNSGLDIIA AESLTDAATK VVAAAEGK