| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2217 |
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| Symbol | sdhA |
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| ID | 3519885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2316824 |
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| End bp | 2318590 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284674 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_268942 |
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| Protein GI | 71279427 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGTTC CAATTCGTGA ATTTGACGCC ATTGTTATTG GCGCAGGCGG TGCAGGTATG
CGCGCTGCAT TAGCAATTTC AGAATCAGGC AAATCTTGTG CCTTGATTTC TAAAGTATTT
CCAACTCGAT CTCATACTGT ATCGGCTCAA GGTGGTATTA CCGTAGCTTT AGGTAATGCC
CATGAAGATC ACTGGGAACA ACACATGTAC GATACCGTTA AAGGTAGCGA TTATATCGGT
GACCAAGACG CCATCGAATA TATGTGTAAA ACAGGCCCAG AGTCTATTAT AGAATTAGAG
AAAATGGGTT TACCGTTTTC TCGTACGGAA GAAGGTAAAA TTTACCAACG TCCATTTGGT
GGCCAGTCTA AAAACTTTGG TGGCGAACAA GCCGCTCGTA CTGCTGCCGC AGCTGACCGT
ACAGGTCATG CACTACTTCA TTGTTTATAT CAACAAAACG TTAAAAACAA AACGAATGTT
TACTCAGAAT GGTATGCATT AGATTTGGTT AAAAACAGTG ATGGTGCTGT CGTTGGTACA
ACTGCTATTT GCATTGAAAC TGGCGAAATT GTTTACTTTA AAGCACGTGC TACTGTACTT
GCTACTGGTG GTGCTGGTCG TATATTTGCT TCTACAACCA ATGCTCACAT CAACACCGGT
GATGGTGTTG GTATGTCTCT TCGTGCTGGC ATTCAAATGC AAGACATGGA AATGTGGCAA
TTCCATCCAA CCGGTATAGC TGGTGCGGGT GTACTTGTTA CTGAAGGTTG TCGTGGAGAA
GGTGGTTACC TTCTGAATAA AGACGGCGAA CGCTTCATGG AACGTTATGC ACCAAATGCT
AAAGATTTAG CAGGGCGTGA TGTTGTTGCT CGTTCAATGA TGACAGAGAT TCGTGAAGGT
CGTGGTTGTG ACGGTCCTTG GGGTCCACAT ATTAAGTTGA AGCTTGATCA TCTAGGCCGT
GAAACGTTAT ATAAACGTTT ACCTGGTGTT TGTGATTTAT CTAAAACTTT TGCTCATGTT
GATCCAGCAG AAGAGCCTAT TCCAGTTATA CCTACATGTC ACTACCAAAT GGGTGGTGTA
CCTTGTAATG TTAATGGTCA AGCCCTTAAT ATTGGCAGTG ATGGCAAAGA AACTATCGTT
GAAGGTTTAT TCGCTGTTGG TGAAATCGCT TGTGTATCTG TACATGGTGC AAACCGCTTA
GGCGGTAACT CACTACTTGA TTTAGTAGTA TTTGGTCGTG CAGCAGGTAA CTTCTTAGGT
ACTTACTTAA ACGAAACACA AACTGCAACA GAAGCATCTG AATCTGATCT AGAAGCAGCG
CTTGCACGTA CTAATCGTTG GGAATCTTCT ACTAAAGGTG AAGACCCTGT ACAAATCCGT
AAAGATTTAC AGATGTGTAT GCAAATGAAC TTCTCAGTAT TCCGTGAAGG CGAAGCCATG
GCGCAAGGCA TGAAAGAGCT AACTGAAATA CGTGAACGTT TAAGTGATGC TCGTTTAGAT
GATAAGTCAT CAGAATTCAA CACCCAACGT ATTGAGTGTT TAGAATTAGA TAACTTAATG
GAAACAGCTT TTTGTTCTGC AAAAGCAGCA AACTTCCGAA CAGAATCTCG TGGTGCTCAT
GCACGTCAAG ATTTCACTGA ACGTGATGAC GTAAATTGGT TATGTCACTC AGTCTACACA
CCAGAGACTG AAGAAATGAC CAAACGTGAT GTTAATATGA AACCCGTTCA CCGCGAAGCT
TTCCCTCCGA AAGCACGTGT ATATTAA
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| Protein sequence | MSVPIREFDA IVIGAGGAGM RAALAISESG KSCALISKVF PTRSHTVSAQ GGITVALGNA
HEDHWEQHMY DTVKGSDYIG DQDAIEYMCK TGPESIIELE KMGLPFSRTE EGKIYQRPFG
GQSKNFGGEQ AARTAAAADR TGHALLHCLY QQNVKNKTNV YSEWYALDLV KNSDGAVVGT
TAICIETGEI VYFKARATVL ATGGAGRIFA STTNAHINTG DGVGMSLRAG IQMQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKDGE RFMERYAPNA KDLAGRDVVA RSMMTEIREG
RGCDGPWGPH IKLKLDHLGR ETLYKRLPGV CDLSKTFAHV DPAEEPIPVI PTCHYQMGGV
PCNVNGQALN IGSDGKETIV EGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGNFLG
TYLNETQTAT EASESDLEAA LARTNRWESS TKGEDPVQIR KDLQMCMQMN FSVFREGEAM
AQGMKELTEI RERLSDARLD DKSSEFNTQR IECLELDNLM ETAFCSAKAA NFRTESRGAH
ARQDFTERDD VNWLCHSVYT PETEEMTKRD VNMKPVHREA FPPKARVY
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