| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2215 |
|---|
| Symbol | sdhC |
|---|
| ID | 3518519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2316108 |
|---|
| End bp | 2316482 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637284672 |
|---|
| Product | succinate dehydrogenase, cytochrome b556 subunit |
|---|
| Protein accession | YP_268940 |
|---|
| Protein GI | 71278847 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.172479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC AACGTCCTGT AAACCTAGAT TTAACTACGA TAAAAATGCA TCCAGCAGCT
AATGCTTCAA TTTTACACCG TGTATCTGGT GTAATTATGG TTTTTGCTAT TGGTATTTTA
TTGTTTACCC TTTCAACCTC TCTTTCTTCT GCTGAAGGAT TTGCCCAAAT TCAAGGTTAC
CTTGATGGCT TTTTCTTTAA ATTCATTATT TTCGGCTGTC TTTCTGCCTT GACCTTTCAT
GTTTTAGCGG GTGTTCGTCA CTTGCTAATG GATCTAGGCC ATTTTGAAGA ACTAGCTTCA
GGTAATGCCA CTGCCAAATT AATCATGGTT ATTTGGTTAG CAGTATCAGC AGTTATAGGA
GTTTGGTTAT GGTAA
|
|---|
| Protein sequence | MKKQRPVNLD LTTIKMHPAA NASILHRVSG VIMVFAIGIL LFTLSTSLSS AEGFAQIQGY
LDGFFFKFII FGCLSALTFH VLAGVRHLLM DLGHFEELAS GNATAKLIMV IWLAVSAVIG
VWLW
|
|---|
| |