Gene CPS_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2190 
Symbol 
ID3522562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2286445 
End bp2287566 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content40% 
IMG OID637284647 
Productaminotransferase, class V 
Protein accessionYP_268915 
Protein GI71282090 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0995229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTC AATCTTTTTT TCCGCCACAG CGCACTTTGA TGGGACCGGG TCCATCAGAT 
GTTAGCCCAC GTGTTTTATC TGCCTTAGCA AGACCTACCA TTGGGCATCT TGACCCTTGT
TTTGTTGCCA TGATGGATGA AGTAAAAGAA TTACTTCAAT ATGCATTTCA AACGACAAAC
AAGTTTACTA TGGCCGTATC GGCTCCTGGC TCTGCGGGTA TGGAAGCTTG TTTTGTAAAT
TTAATTACCC CTGATGATAC CGTAGTTGTT TGTGTTAATG GTGTATTTGG CATGCGTATG
ATTGAAAATG TTAATCGTAT TGGTGCTAAA TTAGTGGTTG TTGAAGGTGA ATGGGGCAGA
GCAGTTGACC CGCAAGCATT AGAGGCTTCA CTGAAAGAAA ACCCACAAGC AAATTTTGTT
GCGTTTGTTC ATGCTGAAAC GTCTACAGGA GCATTATCTG ATGCCAAAAC ATTGTGTGCT
ATCGCTAAAA ATCATGATTG TTTAACTATT GTTGATGCCG TGACGTCTTT AGGTGGTGTT
GAGTTACGTG TTGATGAGTG GCAAATTGAT GCAGTGTATT CAGGCAGTCA AAAATGTTTA
TCTTGTGTCC CTGGTTTATC ACCAGTAAGT TTTAGTGATA GAGCTGCAGA GGTGATTCAA
AATCGTGGCA TAGCGGTCCA AAGTTGGTTT CTTGATCAAT CACTTGTTAT GGGGTATTGG
TCGGGAGAAG GAAAGCGCAG TTATCATCAT ACTGCTCCTG TTAATTCTTT ATATGCATTA
CATGAATCGT TAGTAATGCT ACAAAATGAA GGTCTAGAAA ATAGCTGGGC TCGACATAAA
ACCATGCACG ATAAATTAAG TACAGGGTTA GCTGAGTTAG GTTTAGACTT TATTGTGCCA
GCAGATGAAC GATTACCACA GTTAAATGCA GTCTATATTC CAGAGGGTAT TGATGACGCT
AAAGTAAGAA ATTTTTTACT GAATGAATAT AACCTAGAGA TTGGCGCGGG TTTAGGTGCT
TTTGCTGGTA AAGCATGGCG TATAGGTTTA ATGGGCTATG CTGCACGCAA TGAAAATGTC
ACCTTATGCT TAGCAGCGTT AAAAGAAGCT TTAAAGCAAT AG
 
Protein sequence
MTIQSFFPPQ RTLMGPGPSD VSPRVLSALA RPTIGHLDPC FVAMMDEVKE LLQYAFQTTN 
KFTMAVSAPG SAGMEACFVN LITPDDTVVV CVNGVFGMRM IENVNRIGAK LVVVEGEWGR
AVDPQALEAS LKENPQANFV AFVHAETSTG ALSDAKTLCA IAKNHDCLTI VDAVTSLGGV
ELRVDEWQID AVYSGSQKCL SCVPGLSPVS FSDRAAEVIQ NRGIAVQSWF LDQSLVMGYW
SGEGKRSYHH TAPVNSLYAL HESLVMLQNE GLENSWARHK TMHDKLSTGL AELGLDFIVP
ADERLPQLNA VYIPEGIDDA KVRNFLLNEY NLEIGAGLGA FAGKAWRIGL MGYAARNENV
TLCLAALKEA LKQ