Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2185 |
Symbol | |
ID | 3518747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2281548 |
End bp | 2283401 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284642 |
Product | putative lipoprotein |
Protein accession | YP_268910 |
Protein GI | 71278647 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0983749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTA AAAAATCCCT GTTAGTTATC GCTGTTGCCA CAGCTTTACT CAGTGCTTGT TCAGAAGACA AAGTTTCTCC TCAAAATAAC GAACAAACAG CTGCCCCTGT TAAGGTAAAC ACAGTTAAAG CATCATCAGC CTCAGAACAG GCCAATGCGT TATTTGACAC TATTTTTAAA GAAGGGGTTA ACCGCGACCC CGTGAGACAA ACCTCTTTAG GCATTAAAAC AGATTACGAT AAATGGAACG ACCTTTCAGA ATCAAACGCA GCAAATGAGT TAGCAATCGC TAAAGCAAAC CTTGTACGAG TTCAAGCTAT TGACGTTACC ACGCTTGATA TACAAACTAA AATAAGCCTA AACTTATTCA TTCAAAATCT AGAAAACCAG ATCGCAGATT ATAAATGGCG CTTTCATAGT TACCCTGTTA ATCAAATGCA TGGCACCCAT TCACAAATAC CTGCTTTTTT AATTAACCAG CACTCAATCA TTAACGTTAA AGAAGCACAA GATTATATCG CTCGTGTTCG TGGTGCTCAA AAATTGCTAG AGCAGCTTGT TGAACAGCTT AAATTGCGTG AAGCAAAAGG TATTATTGCC CCAAAATTTG TCTTCCCACA TGTTATTAGA GACTCAAAAA ACATTCTTGT TGGCGCCCCG TTTGATGACG AAGCTAACAG CACAATATTT GCCGATTTCA CTCGAAAGAT TAATAAACTA AACATTAGTG ATGACGAGAA AGCAACCTTA ATTACTGACG TAAAAATAGC ATTAATTGAT AACTTAAAAC CAGGTTACGA ACAACTAATT ACTTACTTAG CAACGCTTGA GAAAAAAGCC GACACCCGTG ACGGTGCTTG GAAATTTCCT GACGGTGAAG CCTTTTACAA GAATGCTTTA AAGCGCACTA CCACAACTGA CTTAACTTCA GAGCAAATTC ATACTATTGG TTTAAGTGAA GTATCACGTA TTCATAATGA AATGCGTGTG ATTATGAAGC AAGTTGGCTT TGATGGCAGT CTGAACGAGT TTTTCGATTT CATGCGTACC GACCAGCAGT TTTACTATCC AGCTAGCGAC GAAGGAAAAC AGCGTTATAT AGCAGAAGCA GTCGCTCTTA TTGACGATAT GCAAAGCCGC TTAGATAGCT TATTTTTAAC CAAACCCAAA GCAGCGTTAA AAGTTAAAGC CGTTGAAGGG TTTAGAGAAA AATCTGCTGG TAAAGCGTTT TATGAACGCC CTGCTCCGGA TGGATCCCGT CCAGGGATTT ATTACGCCAA TCTTTACGAC ATGGAAGCTA TGCCGACTTA TCAAATGGCT GCGTTAGCAT ATCATGAAGG TATTCCGGGC CATCATATGC AATTAGCAAT CAAACAAGAA TTAACAGGCA TTCCAATGTT CCGTAAATTT GGTGGCTATA CAGCTCATAC AGAAGGCTGG GGACTTTATT CAGAAATGAT CCCAAAAGAA ATAGGTTTAT ACCAAGACCC TTATTCTGAC TTTGGTCGTT TAGCCATGGA ATTATGGCGA GCATGTCGCT TAGTGGTTGA TACGGGTATT CACACTAAAC AATGGACACG TGAACAAGGT ATAGAGTACT ACGCTACAAA CACGCCTAAT GCCCTATCTG ATGCCGTTAA AATGGTCGAA CGCCATGTAG TTATGCCATC ACAAGCGACA GCTTACAAAA TTGGTATGAA TAAAATCATT GAATTACGTG AAAATGCTCG AGTTCAATTA GGTGATAAAT TTGATATTCG TGAATTTCAT GACGTAGTTT TAAAAAATGG TCCAGTACCG CTTAACGTCT TAACTGACCT AGTTAATGAC TATATAAAAA CTAAGAAAGC CTAG
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Protein sequence | MTFKKSLLVI AVATALLSAC SEDKVSPQNN EQTAAPVKVN TVKASSASEQ ANALFDTIFK EGVNRDPVRQ TSLGIKTDYD KWNDLSESNA ANELAIAKAN LVRVQAIDVT TLDIQTKISL NLFIQNLENQ IADYKWRFHS YPVNQMHGTH SQIPAFLINQ HSIINVKEAQ DYIARVRGAQ KLLEQLVEQL KLREAKGIIA PKFVFPHVIR DSKNILVGAP FDDEANSTIF ADFTRKINKL NISDDEKATL ITDVKIALID NLKPGYEQLI TYLATLEKKA DTRDGAWKFP DGEAFYKNAL KRTTTTDLTS EQIHTIGLSE VSRIHNEMRV IMKQVGFDGS LNEFFDFMRT DQQFYYPASD EGKQRYIAEA VALIDDMQSR LDSLFLTKPK AALKVKAVEG FREKSAGKAF YERPAPDGSR PGIYYANLYD MEAMPTYQMA ALAYHEGIPG HHMQLAIKQE LTGIPMFRKF GGYTAHTEGW GLYSEMIPKE IGLYQDPYSD FGRLAMELWR ACRLVVDTGI HTKQWTREQG IEYYATNTPN ALSDAVKMVE RHVVMPSQAT AYKIGMNKII ELRENARVQL GDKFDIREFH DVVLKNGPVP LNVLTDLVND YIKTKKA
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