| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2122 |
|---|
| Symbol | |
|---|
| ID | 3521522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2213304 |
|---|
| End bp | 2214647 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637284580 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_268848 |
|---|
| Protein GI | 71281053 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA ATCAACAAAA TAAGAAATCA TTTGAAGTAC AGCTAACTCA GCTATTCTTA
TTTACCTCTT TGCCGCTATT TTTCTTGCTA ATTGGGGTGA TGATATATGC GAATATATCG
CTATATTTGA TTTTATTAAC CATGCTTATT AGTAGTTTAG TGATTGTTTA TAGTCACAGT
AAACTTCACC AAAAGTCAGC TTATCAATTT CGAAGTTTAA GTAATTTACT CGATGCTATG
GTACAAGGCG ATTATAGTCT GAGAGCCCGT ATTAGTGATG GTGATGAAGC ATTAAATGAA
TTAGTTGATT CGATAAATAG CCTTAGTTTA CGCCTTAATA AGCAAAGAAT TGAGACGACA
GAAAGTCAAT TGTTACTAAC TACTGTAATT AACCATATTG ATGTCGCTAT TCTCGCTTTA
AATGAGAATA ATGAATTGGT CTTGACTAAC CCCGCCGCAA AAAAATTATT GCAAATACCT
GCCGAGCAGC AAGAATTTGA CTTAATTGAA TCATTCTCAC AATTTAGTCA AATCGCAGCA
ATGAACAGTG GTAATAGCCA AGTAATGTCG CTTTATTTTG CTAATCAGCA AGGTAAGTTT
AATGTTCACC TTGAAGAATA TCGCGAAAAT GGCAAACCAC AAAAGTTAGT GTTTATTACT
GATGTTAGCA CTATGCTTCG TAGTGAAGAG CGAAATGCAT GGCAAGCGTT AGTGCGGGTT
ATTAGTCATG AAATAAACAA CTCTTTATCT CCTATCGCTT CAATAAGCCA AAGCTTAAGG
CGCTTACTTG CCCGACAAGA GAAACTTGAA AACCATAAAG AATATCTGGT TGAAGGCTTA
TCTATCATTT CACAACGCAG TAATAGCTTA ACTGAGTTTG TTAATAGTTA TAAGCAAATA
GCCAGTTTAC CTGAGCCAAA AAAACAGCCA AGTTCGGTAC TGGAATTAGT TAATAAGACG
GTAGCCTTAT ACCCGGATGA ATGCATTGAA GTACAAAACA TAGACGACAT CACTTTAGTT
CTTGATGCAG TGCAATTTGA ACAAGTGCTT ATTAACTTGG TTAAAAATGC CGTAGAAGCG
GTAAAAAGTG CTGGTGAAGC AGGTAAGGTT GCAATTAGCG GGCAAGTTAA TGGAAAGGTA
TTTAGTTTGT CATTAGCGGA CGATGGCACA GGTGTAAGCA ATCTAGAGAA TTTGTTTGTG
CCTTTTTATA GCACAAAAAG TAAAGGCTCA GGCATAGGTT TAGTCTTATG CCGACAAATT
ATTGAAGCAC ATGGCGGCAA GATAACCTTA ACAAATAGAC TAGGTGTCAG TGGTTGCATA
GCAACCATAG AGTTACCCCT GTGA
|
|---|
| Protein sequence | MKQNQQNKKS FEVQLTQLFL FTSLPLFFLL IGVMIYANIS LYLILLTMLI SSLVIVYSHS
KLHQKSAYQF RSLSNLLDAM VQGDYSLRAR ISDGDEALNE LVDSINSLSL RLNKQRIETT
ESQLLLTTVI NHIDVAILAL NENNELVLTN PAAKKLLQIP AEQQEFDLIE SFSQFSQIAA
MNSGNSQVMS LYFANQQGKF NVHLEEYREN GKPQKLVFIT DVSTMLRSEE RNAWQALVRV
ISHEINNSLS PIASISQSLR RLLARQEKLE NHKEYLVEGL SIISQRSNSL TEFVNSYKQI
ASLPEPKKQP SSVLELVNKT VALYPDECIE VQNIDDITLV LDAVQFEQVL INLVKNAVEA
VKSAGEAGKV AISGQVNGKV FSLSLADDGT GVSNLENLFV PFYSTKSKGS GIGLVLCRQI
IEAHGGKITL TNRLGVSGCI ATIELPL
|
|---|
| |