| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2119 |
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| Symbol | |
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| ID | 3519988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2208567 |
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| End bp | 2209292 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284577 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_268845 |
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| Protein GI | 71279529 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAATA CATTAATTAA ATTAGAAAAC ATTCAAAAAG TATTTTTTAC CGATGAAGTA
GAAACCCATG CGTTAGCAGA CATAACGTTA ACTATTAATA AAGGTGAATA TGTCTCAATT
TCAGGACCTT CTGGTTGTGG AAAATCTACT TTGCTTTCGT TATTAGGCTT ATTAGATGCT
AGCACTGAAG GCTTGTACCA GTTGGCTGAA CATGATGTTT CTAATATATC TAAAAAAGAG
CGTGCCCGAA TTCGTAATAT GGAAATTGGC TTTATATTTC AATCTTTCAA CTTGATCAGT
GACCTTGATG TTGAAGAGAA TGTTGAATTG CCACTTACTT ATCGTAAAGA TCTAAGCAAA
GACCAGCGTA AGGCAATGGT TAAGGAAGCA TTAGAAAAAG TGAATATGTC GCACAGATCT
AAGCATTTTC CTTCGCAACT TTCTGGTGGC CAACAGCAAC GTATCGCGGT AGCACGCGCC
ATCGTTGGGA AACCTTCAAT TATCCTTGCT GATGAACCTA CCGGAAATTT AGATTCGAAA
AATGCTGAAG CAGTAATGGA ACTTTTAGAC TTATTACATG CAGAAGGTGC CACTATCTGT
ATGGTGACAC ATGATCCTCG CTCAGCGCAG CGAGCTTCTC GTAATATTGA TATTTTAGAT
GGACAGGTGA TTAGTGATAA CTCGTTAACC AAAGAAAATA AATCAAATGA CACTGTAGCA
GCTTAG
|
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| Protein sequence | MSNTLIKLEN IQKVFFTDEV ETHALADITL TINKGEYVSI SGPSGCGKST LLSLLGLLDA
STEGLYQLAE HDVSNISKKE RARIRNMEIG FIFQSFNLIS DLDVEENVEL PLTYRKDLSK
DQRKAMVKEA LEKVNMSHRS KHFPSQLSGG QQQRIAVARA IVGKPSIILA DEPTGNLDSK
NAEAVMELLD LLHAEGATIC MVTHDPRSAQ RASRNIDILD GQVISDNSLT KENKSNDTVA
A
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