Gene CPS_2116 details

Gene Information

• Locus tag: CPS_2116
• Symbol: ruvA
• ID: 3520012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2204993
• End bp: 2205628
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637284574
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_268842
• Protein GI: 71279553
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTGGTC GTTTACGTGG CATGCTTGTG GAAAAAAACT CTCCTGAAAT ATTAATTGAA 
TGTGCTGGCG TGGGCTATGA AGTCACCATG CCAATGACGA GTATTTATGC CTTACCTGAG 
CTTGAACAGC AGGCAACTAT TTATACTCAC TTTGTTGTAC GTGAAGATGC TCAATTGCTT 
TATGGCTTCG CCAATAAAGT AGAACGTAAG TTATTCCGGT TATTAATTAA AGTTAATGGT 
GTAGGTCCTA AATTAGCGTT AGCTATTTTA TCAAACATGT CTGCTGATCA ATTTGTTAGT 
TGTGTTCGTC ACGATGATAT TAGCGCCATT GTAAAAATCC CGGGTGTTGG TAAAAAGACA 
GCAGAGCGTT TGCTTATTGA AATGCGTGAT CGTTTGAAAG ATTGGCAAGC ACAACAAATA 
CACTTAGTTA GTGATGATGG CGTGATACCA GAACAACTCT CTGCTGAATT GAGCCAAGAA 
ACTACTTTTG TTAATGATAA TAAAGGCGAT GCTATTAACG CTTTACTTTC ACTTGGCTAT 
AAACAAGTAC AGGCAGATAA AGCGGTTAAA TCCGTATATA ATCGCGGTAT GTCTAGCGAA 
AACATTATTC GCGATGCATT AAAATCAATG ATATAG 

 

Protein sequence

MIGRLRGMLV EKNSPEILIE CAGVGYEVTM PMTSIYALPE LEQQATIYTH FVVREDAQLL 
YGFANKVERK LFRLLIKVNG VGPKLALAIL SNMSADQFVS CVRHDDISAI VKIPGVGKKT 
AERLLIEMRD RLKDWQAQQI HLVSDDGVIP EQLSAELSQE TTFVNDNKGD AINALLSLGY 
KQVQADKAVK SVYNRGMSSE NIIRDALKSM I