Gene CPS_2115 details

Gene Information

• Locus tag: CPS_2115
• Symbol: ruvC
• ID: 3518643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2204225
• End bp: 2204752
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637284573
• Product: crossover junction endodeoxyribonuclease RuvC
• Protein accession: YP_268841
• Protein GI: 71277765
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACAATAA TATTAGGAAT TGATCCTGGT TCACGCTTTA CTGGTTACGG CGTTATCAAA 
CAAGAAAAGC AACGTTTTAC CTACCTTGGT AGTGGTTGCA TTAAAGCGAT GAGTCAAGGT 
GAAGATTTAG CTTCACGTTT GCAAACAATT TTTGCTGGCG TATCTGAGTT AATTATTCAA 
TTCAAGCCAG ATATGTTTGC CATTGAACAA GTTTTCATGG GGGTGAATCC TGGCGGAGCT 
TTGAAACTGG GCCAAGCACG GGGTGCAGCT ATTGTTGCGG CAACCAATTC AGGGTTAACC 
ATCGCAGAGT ATTCAGCAAG ACAAATTAAG CAAGCTGTTG TAGGTACAGG CGCAGCAGAT 
AAAAACCAAG TACAGCATAT GGTAAAAAGT ATTTTAAAGT TACCAGGTAC TCCTCAGGCA 
GATGCTGCCG ATGCCTTAGC GGTAGCACTA TGTCATGGTC ATAGTCATAC CAGTGCCGCC 
ATATTAGCCG GTCAAGCTAC AAAAATCGTT AGAGGGCGTT TACGCTAA 

 

Protein sequence

MTIILGIDPG SRFTGYGVIK QEKQRFTYLG SGCIKAMSQG EDLASRLQTI FAGVSELIIQ 
FKPDMFAIEQ VFMGVNPGGA LKLGQARGAA IVAATNSGLT IAEYSARQIK QAVVGTGAAD 
KNQVQHMVKS ILKLPGTPQA DAADALAVAL CHGHSHTSAA ILAGQATKIV RGRLR