| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2081 |
|---|
| Symbol | |
|---|
| ID | 3523258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2162460 |
|---|
| End bp | 2163854 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637284540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_268808 |
|---|
| Protein GI | 71277851 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAA ATTTAGGTTT GTTTGGTGCA TTATTTTTAC TCATTGTTCT TGCTTTACGT
GGTGGAAATA TTGTTTTTTC AGCATTACTT GCTTCACTAG TAGTTATTGT CACCAACCCG
ATTGCTTTAG CTGATAGCTT AAATCAATAC TTTACTTTTG GTAAACTCGG CGCTTTTAGT
TTTGCAGGCA AATTTTTTCT TTTATTTGCT TGTGGGGCCA TGTTTGGTCG AGTCATGGGA
GAAAGCAAAG CTGCCGCGAG CATTGCTTTC GCCTTAGCTG AAAAACTAGG CGCACAACGT
ACCCTTTGGA TTGTTACTTT AGCTTGCGCC TTACTCACCT ATAGTGGTGT AGTGGTATTT
GTAGTTATTT TTGCTATTTA CCCATTAGGT TTAAAATTAA TAGAACAAGC AAATATTCCT
AAAAGGTTAC TTGTTGGCGC TATCGCATTA GGTAGTGGTA CTTTTACCCT AACGGCTTTA
CCCGGTACTC CGTCAATACA AAATGTTATC GCCTCTTCGG CTTTAGGCAC TGATTTATTT
GCCGCACCAT TGCTTGGTAT CATTGCCACT ATTATTATGT TCGGCGCTGG TATGTGGTAT
TTGGAAAAAC AGCGTAAAAT TGCGCAGGCT AATAATGAAG TATTCATTGA TAACCAATCG
CGTAATAACT CACCAGCCAA TAAAGCTAAA GAGATAAATT CCGAAGACTT ACCCCATTGG
ACATTAGCTC TCATACCTTT ATTTTTTGTC ATCGTTAGCA TCCTTGCTCC GCGTATATTA
ATCGCTATAT ACGGTACAGA ACTTACTCTA GGTCATGACA CCTTTAATCA ACTGATTAAA
TTTGCAACCA CGCAACTTAT TTTATGGCCA AGTATTTCAC TGTTTATTGG TAGTCTTGTT
GGTTTAATTA TTTTCAAATC AGTACGAACT CAAGCTTTAA AAGTACTAGG CGATGGTACT
CAAGATTCAA TTTTACCCTT AATAAATACC GCAGCGGTTA TTGGTTTTGG TGGCGTTGTT
ACTCAAACAC AAGGCTTTGG TGATTTTGTC CAGTATTTAC TGACAATTGA TCTTCCTCCG
TTGATGTCTA TGTTTGTTTC AGTAAGTTTA AGCTCTGCCG TTGTTGGCTC ATCTACAGGT
GGGTTACAAA TATTCTTACA AACCATGGCG CCTGCCTATT TAGAGATGGG TATCCCTGTC
GACATATTGC ATCGCATAGC CACGATTGCT AGCGGAGGAG TGGATTCGCT ACCACATTGT
GGTGCTGTAG TTGCGATGTT AACCATTACC GGTATGACAC ATAAGCAAGC TTATAAAGAT
ATTTTTGTCC TTACGGTGAT GATCCCTGTG GCTGCAACAT TGGTCATTAT TGGCTGTGCG
GCTATCTATT TTTAG
|
|---|
| Protein sequence | MIENLGLFGA LFLLIVLALR GGNIVFSALL ASLVVIVTNP IALADSLNQY FTFGKLGAFS
FAGKFFLLFA CGAMFGRVMG ESKAAASIAF ALAEKLGAQR TLWIVTLACA LLTYSGVVVF
VVIFAIYPLG LKLIEQANIP KRLLVGAIAL GSGTFTLTAL PGTPSIQNVI ASSALGTDLF
AAPLLGIIAT IIMFGAGMWY LEKQRKIAQA NNEVFIDNQS RNNSPANKAK EINSEDLPHW
TLALIPLFFV IVSILAPRIL IAIYGTELTL GHDTFNQLIK FATTQLILWP SISLFIGSLV
GLIIFKSVRT QALKVLGDGT QDSILPLINT AAVIGFGGVV TQTQGFGDFV QYLLTIDLPP
LMSMFVSVSL SSAVVGSSTG GLQIFLQTMA PAYLEMGIPV DILHRIATIA SGGVDSLPHC
GAVVAMLTIT GMTHKQAYKD IFVLTVMIPV AATLVIIGCA AIYF
|
|---|
| |