Gene CPS_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2061 
SymbolhisD 
ID3520186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2142087 
End bp2143427 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content39% 
IMG OID637284521 
Producthistidinol dehydrogenase 
Protein accessionYP_268789 
Protein GI71279725 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATA AAGTAAAAAT TCACAGACTA TCAGATCTCA GTGCGGAACA AAGAAATAAA 
CTATTACAAC GCACAGAATC TAACTTAGAT AACTTTATCG ATATTGTTAA GCCTATAATA
GAAAATGTAA AATTGAATGG TGACAAAGCT TTATCCGAGT ATGCTAAAAA GTTCGATAAA
GCAGAGGTAA GCACTGATCA AATTCAAGTA ACACAAGCTG AATTCGACGA AGCATTCACA
CTAGTTGATG AAGAAGTTAT TCAAACTCTC AGCTATTCTA TTGATAATAT TAAAAAGTTT
CATGAAGCCC AAATGCCTGA AGAAATGTGG ATGAAACAAA TAAGACCCGG CTGCTACGCA
GGCGACCGTT TTACACCTAT TAATGCTGTT GCATGCTATA TCCCTAGAGG TAAAGGATCT
TTTCCAAGTG TTGCAATAAT GACTGCTGTT CCTGCAATTG TTGCCGGAGT ACCGACTGCA
ATTATAATTA CTCCTCCAGG TACTGATGGG AAAGTAGATG CTGCTACATT GGTTGTTGCT
AAACTAGTAG GCATTGATAA AGTATTTAAA TGTGGTGGTG CACAAGGCAT TGCCGCAGTA
GCTTACGGTA CAAATACCGT TCCTAAATGT GACAAAGTTG TTGGCCCAGG TAGCCCATTT
GTCGTTGCCG CCAAAAAACT ACTCGCTGAT ATTATTCACC CAGGTACTCC TGCAGGACCT
AGTGAAGCTA TTGTATTAGC AGACGATACG GCCAATCCGA AATTAGCCGC TTTAGATTTA
CTTGTTGAAG CGGAGCATGG CCCTGATTCA TCGGCCTTCT TGGTAACAAA TAGTAAAGAA
CTAGCCGAGC AAGCTCAAGT AGCGATAAAT GAATATTGGC AACATATGGA TAGATTGCGT
GTTGATTTTT CGTCAACTGT TTTAAGTGGT GATAATGGCG GCATCGTGCT TACTTCAACA
TTTGAAGAAG CGGTAGACTT TTGTAATGAT TATGCTGCTG AACATTTGTT GATATTGAGT
AAAAGTCCTT TTGATCACTT AGGAAAAATA ATCAATGCAG GTGAAATTTT GCTTGGCGAA
AACACGCCTA TTTCAATTGC CAATTATACT TTAGGGCCTA ACGCTGTTTT ACCAACATCA
ATGGCAGCAA AAACAGCCTC ACCACTATCA GTGTTTGATT ATTTGAAAAG CTGTTCAATT
GGATACTTAA CAAGAGAAGG CTATGAAGAA TTAGCACCGC ATACATATAG ATTCGCCAAG
TATGAAGGTT TTGATGCACA CGCCAATGCC GTGTCTCATC TAAGAGACGA AGCCATTAAA
AGTGAAAAAA AAATTAAGTG A
 
Protein sequence
MTHKVKIHRL SDLSAEQRNK LLQRTESNLD NFIDIVKPII ENVKLNGDKA LSEYAKKFDK 
AEVSTDQIQV TQAEFDEAFT LVDEEVIQTL SYSIDNIKKF HEAQMPEEMW MKQIRPGCYA
GDRFTPINAV ACYIPRGKGS FPSVAIMTAV PAIVAGVPTA IIITPPGTDG KVDAATLVVA
KLVGIDKVFK CGGAQGIAAV AYGTNTVPKC DKVVGPGSPF VVAAKKLLAD IIHPGTPAGP
SEAIVLADDT ANPKLAALDL LVEAEHGPDS SAFLVTNSKE LAEQAQVAIN EYWQHMDRLR
VDFSSTVLSG DNGGIVLTST FEEAVDFCND YAAEHLLILS KSPFDHLGKI INAGEILLGE
NTPISIANYT LGPNAVLPTS MAAKTASPLS VFDYLKSCSI GYLTREGYEE LAPHTYRFAK
YEGFDAHANA VSHLRDEAIK SEKKIK