Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2061 |
Symbol | hisD |
ID | 3520186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2142087 |
End bp | 2143427 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284521 |
Product | histidinol dehydrogenase |
Protein accession | YP_268789 |
Protein GI | 71279725 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.164516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATA AAGTAAAAAT TCACAGACTA TCAGATCTCA GTGCGGAACA AAGAAATAAA CTATTACAAC GCACAGAATC TAACTTAGAT AACTTTATCG ATATTGTTAA GCCTATAATA GAAAATGTAA AATTGAATGG TGACAAAGCT TTATCCGAGT ATGCTAAAAA GTTCGATAAA GCAGAGGTAA GCACTGATCA AATTCAAGTA ACACAAGCTG AATTCGACGA AGCATTCACA CTAGTTGATG AAGAAGTTAT TCAAACTCTC AGCTATTCTA TTGATAATAT TAAAAAGTTT CATGAAGCCC AAATGCCTGA AGAAATGTGG ATGAAACAAA TAAGACCCGG CTGCTACGCA GGCGACCGTT TTACACCTAT TAATGCTGTT GCATGCTATA TCCCTAGAGG TAAAGGATCT TTTCCAAGTG TTGCAATAAT GACTGCTGTT CCTGCAATTG TTGCCGGAGT ACCGACTGCA ATTATAATTA CTCCTCCAGG TACTGATGGG AAAGTAGATG CTGCTACATT GGTTGTTGCT AAACTAGTAG GCATTGATAA AGTATTTAAA TGTGGTGGTG CACAAGGCAT TGCCGCAGTA GCTTACGGTA CAAATACCGT TCCTAAATGT GACAAAGTTG TTGGCCCAGG TAGCCCATTT GTCGTTGCCG CCAAAAAACT ACTCGCTGAT ATTATTCACC CAGGTACTCC TGCAGGACCT AGTGAAGCTA TTGTATTAGC AGACGATACG GCCAATCCGA AATTAGCCGC TTTAGATTTA CTTGTTGAAG CGGAGCATGG CCCTGATTCA TCGGCCTTCT TGGTAACAAA TAGTAAAGAA CTAGCCGAGC AAGCTCAAGT AGCGATAAAT GAATATTGGC AACATATGGA TAGATTGCGT GTTGATTTTT CGTCAACTGT TTTAAGTGGT GATAATGGCG GCATCGTGCT TACTTCAACA TTTGAAGAAG CGGTAGACTT TTGTAATGAT TATGCTGCTG AACATTTGTT GATATTGAGT AAAAGTCCTT TTGATCACTT AGGAAAAATA ATCAATGCAG GTGAAATTTT GCTTGGCGAA AACACGCCTA TTTCAATTGC CAATTATACT TTAGGGCCTA ACGCTGTTTT ACCAACATCA ATGGCAGCAA AAACAGCCTC ACCACTATCA GTGTTTGATT ATTTGAAAAG CTGTTCAATT GGATACTTAA CAAGAGAAGG CTATGAAGAA TTAGCACCGC ATACATATAG ATTCGCCAAG TATGAAGGTT TTGATGCACA CGCCAATGCC GTGTCTCATC TAAGAGACGA AGCCATTAAA AGTGAAAAAA AAATTAAGTG A
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Protein sequence | MTHKVKIHRL SDLSAEQRNK LLQRTESNLD NFIDIVKPII ENVKLNGDKA LSEYAKKFDK AEVSTDQIQV TQAEFDEAFT LVDEEVIQTL SYSIDNIKKF HEAQMPEEMW MKQIRPGCYA GDRFTPINAV ACYIPRGKGS FPSVAIMTAV PAIVAGVPTA IIITPPGTDG KVDAATLVVA KLVGIDKVFK CGGAQGIAAV AYGTNTVPKC DKVVGPGSPF VVAAKKLLAD IIHPGTPAGP SEAIVLADDT ANPKLAALDL LVEAEHGPDS SAFLVTNSKE LAEQAQVAIN EYWQHMDRLR VDFSSTVLSG DNGGIVLTST FEEAVDFCND YAAEHLLILS KSPFDHLGKI INAGEILLGE NTPISIANYT LGPNAVLPTS MAAKTASPLS VFDYLKSCSI GYLTREGYEE LAPHTYRFAK YEGFDAHANA VSHLRDEAIK SEKKIK
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