| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2058 |
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| Symbol | fdhA1 |
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| ID | 3523273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2137903 |
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| End bp | 2140806 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284518 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_268786 |
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| Protein GI | 71278992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.896651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATA TTTATGATCC AAAGGCTGCA CAGAATCAGT CAACTCGCAG CCAAAATATA
ATCGATTTTG GTACACCCGA GGTATACTCC GATGTGCAAG TCACGTTAAC TATTGATGGC
CAGGAAATTT CAGTACCTAA AGGCACTTCT GTGCTACGCG CTGCAGCAAT GCTTAATATT
ACCATTCCCA AATTATGTGC CTCAGATAAC TTAGAGTCAT TTGGTTCTTG TCGTTTATGT
GCTGTAGAAA TTGAAGGTCG CCGAGGTATG CCAGCCTCCT GTACTACGCC AGTAGAGCAC
GATATGCAGG TCAGTACCCA AAATAAAAAA ATAGCCCGTT TACGTAAAAA TATTATGGAG
CTATATATTT CCGATCATCC ACTTGATTGC TTAACCTGCC CGAGTAATGG CGATTGTGAA
CTGCAAGATA TGGCCGGTGC AGTAGGTTTA AGAGAAGTGC GCTATGGTTT TGACGGCGAG
AATCACCTTG ATGTTGCTAA AGACACGTCT AATCCCTATT TCACCTTTGA ACCGAGTAAA
TGTATTGTTT GTTCACGATG TGTCCGTGCC TGTGAAGAAG TACAAGGTAC CTTTGCACTA
ACCATTGATG GTCGCGGTTT CGATTCTAAG GTCTCTACCG GTCTTGATAA TGACTTTTTA
AGTTCTGACT GTGTCTCTTG TGGCGCTTGT GTTCAAGCAT GCCCGACTTC AACACTAATG
GAAAAAAGTG TTATTGACCA AGGTCAGCCT GAACATAGTG TTACAACCAC ATGCGCATAC
TGCGGTGTTG GTTGTTCATT CGAAGCGCAT ATGAAAGGTG AAGAAGTAAT ACGTATGGTA
CCAGCAAAAG ATGGGCAAGC TAACCATGGT CATTCATGTG TTAAAGGACG CTTTGCTTTT
GGTTATGCTA CCCATCAAGA TCGTATTACT AGTCCAATGG TGCGAGACTC TATAGACCAA
CCTTGGCAGG AAGTCAGCTG GGATGAAGCC ATTAGTTTTG CCGCGAAAAG GCTCAAAGAG
ATACAGAAAA AACACGGTAA AGATAGTATT GGCGGCATAA CTTCTTCACG CTGTACCAAT
GAAGAAACCT ACTTAGTACA GAAACTTATT CGAGCGGCTT TTGGTAATAA CAATACTGAC
ACATGTGCCA GAGTATGTCA TTCGCCTACT GGTTATGGCT TAAAGGCAAC TTTAGGTGAG
TCTGCAGGCA CTCAAACGTT TGACTCAGTG ATGGAAGCCG ATACTATCAT TGTTATTGGC
GCTAACCCAA CCGATGCTCA CCCTGTTTTT GGTTCACTAT TGAAAAAGCG TTTACGCCAA
GGAGCTCATT TAATTATTGC CGACCCAAGA AAAATTGATT TAGGTAATAG CCCACACGTC
AAATTAGATC ATCATTTACC TTTACGCCCA GGTACTAATG TTGCGTTCAT TAATGCAATG
GCCCATGTTA TTGTCAATGA AGGACTTGAA GATAAAGCCT TTATTGCAGA GCGATGTGAA
ACACAAGCAT ATCAGCAATG GTATAGTTTT ATTAGCGATG TACGTCACTC GCCTGAAAAC
ACCGAAACAA TTACTGGAGT TGATGCTGAC CAATTACGTC AAGCGGCTCG TTTGTATGCC
AAGGTTGATA ACGGCGCCAT TTATTATGGC TTAGGGGTTA CTGAGCACTC TCAAGGCTCA
AGCATGGTAA TGGGGATTGC TAATTTAGCT CTATTGACCG GAAATATTGG CCGAGAAGGT
GTAGGCGTTA ATCCACTCAG AGGCCAAAAT AATGTCCAAG GATCGTGTGA TATGGGGTCT
TTCCCTCATG AATTACCCGG TTACCAGCAT GTTAGTAATG ATGCTTTGAG ATCTAAATTT
GAACAACACT GGCAAGTAGA TATTGATAAT GAGCCAGGGT TGCGTATACC AAATATGTTT
GATGCCGCCA TTGATGGCAG CTTTAAAGGG ATGTATTGTC AAGGTGAAGA TATTGCTCAA
TCAGATCCAA ATACCCATCA TGTTGAGGCT GCGTTAACAT CATTAGAATG TTTGATTGTT
CAAGATATCT TTTTAAATGA AACAGCCAAA TTTGCTCATG TATTTCTACC TGGTTCATCA
TTTTTAGAGA AAGACGGTAC GTTTACTAAT GCTGAACGCC GCATTAATCG TGTCAGAAAG
GTGATGGCAC CACTTGCAGA AAAAGCTGAT TGGCAAGCAA CAATGGCTTT ATCTAATGCA
TTAGGCTATC CAATGAACTA TCAGCATCCA AGTGAAATAA TGGATGAAAT AGCTCAGCTA
ACACCGACAT TTTCAGGTGT CAGCTACCAG AAGCTTGATG AGTTGGGTAG CATACAGTGG
CCTTGCAATG ATAGTAATCC ATTGGGTACA CCAACAATGC ATATTGATGA TTTTCCTATT
GGAAAAGCGA CCTTTGCGCT TACTGAATAT GTTGCCACTG ATGAGCGGGC AAGCCGCAAG
TTTCCATTGT TACTAACTAC CGGTCGAATT TTATCTCAGT ATAATGTTGG TGCACAAACT
CGTCGTACTG AAAATCAGGT GTGGCACGAT AAAGATCAAT TAGAAATTCA TCCTCACGAC
GCCCAAGAAC GAGGTATTCA AGGAGGTGAT AGTTTAGGTA TTAGCAGTCG TGCTGGGAAT
ACAGTACTAA CAGCTAAAAT TACAGAGCGT ATGCAGCCGG GTGTTGTTTA CACAACATTT
CACCATCCAG AAAGTGGTGC AAATGTAGTA ACTACCGATA ATTCAGATTG GGCGACCAAT
TGTCCTGAAT ACAAGGTAAC AGCGGTGCAG GTTGAAAAAG TATCTTCTCC TTCAAACTGG
CAGTTACGAA ATAAAGAATT TTCCATCAAA CAAAACGAAT TTCTACCTAA AAAAAGATCG
GATGAAGCTC GTGTTAAGCT CTAA
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| Protein sequence | MVDIYDPKAA QNQSTRSQNI IDFGTPEVYS DVQVTLTIDG QEISVPKGTS VLRAAAMLNI
TIPKLCASDN LESFGSCRLC AVEIEGRRGM PASCTTPVEH DMQVSTQNKK IARLRKNIME
LYISDHPLDC LTCPSNGDCE LQDMAGAVGL REVRYGFDGE NHLDVAKDTS NPYFTFEPSK
CIVCSRCVRA CEEVQGTFAL TIDGRGFDSK VSTGLDNDFL SSDCVSCGAC VQACPTSTLM
EKSVIDQGQP EHSVTTTCAY CGVGCSFEAH MKGEEVIRMV PAKDGQANHG HSCVKGRFAF
GYATHQDRIT SPMVRDSIDQ PWQEVSWDEA ISFAAKRLKE IQKKHGKDSI GGITSSRCTN
EETYLVQKLI RAAFGNNNTD TCARVCHSPT GYGLKATLGE SAGTQTFDSV MEADTIIVIG
ANPTDAHPVF GSLLKKRLRQ GAHLIIADPR KIDLGNSPHV KLDHHLPLRP GTNVAFINAM
AHVIVNEGLE DKAFIAERCE TQAYQQWYSF ISDVRHSPEN TETITGVDAD QLRQAARLYA
KVDNGAIYYG LGVTEHSQGS SMVMGIANLA LLTGNIGREG VGVNPLRGQN NVQGSCDMGS
FPHELPGYQH VSNDALRSKF EQHWQVDIDN EPGLRIPNMF DAAIDGSFKG MYCQGEDIAQ
SDPNTHHVEA ALTSLECLIV QDIFLNETAK FAHVFLPGSS FLEKDGTFTN AERRINRVRK
VMAPLAEKAD WQATMALSNA LGYPMNYQHP SEIMDEIAQL TPTFSGVSYQ KLDELGSIQW
PCNDSNPLGT PTMHIDDFPI GKATFALTEY VATDERASRK FPLLLTTGRI LSQYNVGAQT
RRTENQVWHD KDQLEIHPHD AQERGIQGGD SLGISSRAGN TVLTAKITER MQPGVVYTTF
HHPESGANVV TTDNSDWATN CPEYKVTAVQ VEKVSSPSNW QLRNKEFSIK QNEFLPKKRS
DEARVKL
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