Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2049 |
Symbol | |
ID | 3521473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2124074 |
End bp | 2125435 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637284509 |
Product | hypothetical protein |
Protein accession | YP_268777 |
Protein GI | 71281004 |
COG category | [S] Function unknown |
COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGAGTC GTGCGTTGTT AACTAAATTA ATATCTAATG AATTATCTGA AAGTGATGTA CTACCTTCAT CTTTATTGAG CAAAATAGCT ACTCATCCAT TACGTGAAAA GCTTTATAAC GAATTGCACA ATAGGCCTTT TCCGTCAATA TCTTCCCCTG CTCAACTTAC GCATATAGCA ATTCAACACC AAGGGAAATT AAAGCAAGAA GAGCATGAAT TTATTTCACT GTTATGTAAT AAATTTCAAG TAAATTCTCC AGCGAAATCA ATGCCGTGTT TTTATCAAGA TTTTGGTTTA TTTAGCCTTC GTTGGGAGCG TCATTTGGAG TATTCCACTT ATACTTTTAT TCACCAAGCT CCGTTAACGG ATCAACCTTT CATTAAAAAT GCTATCGATT ATGTTCCCAG TAATTGGCTC GAAAAAATGC CAGGTCAAGT AATAGCTGCT GTGCATTTGA TTATTGAACC TGAAAATATT GATCAAGAGA TAACACACAA AGTTGAAAAA TATTTTGACA ATATGTCTTT GATAGCGAGC GCTCCCGTAA ATTCACAGGC GAAAGTGTGG AGCTCATTTA AATTACATAA CGACGGTTTT GGTCGTTTTC TGATATACCA ACAAGACTTA TCAGCTGCGC AGCTAGGTCG CTTAACACAA CAATTATTAC AGCTTGATAC ATACCGGTTG ATGGCAACAC TTGGTTTACC ACTAGCTCGA GTTATTAATA GTGAACTTAA TCAATTAGAT TTACAACTGC AACAAGTTAC CACCTATATA GCTTTGGGTA CTGATAAAAG CGATAGGGAG CTACTTACAC AAGTATCTAA AATAGCAGCG AAAGTGGAAG ACTATCGTAG TCAAAGTACT TACCGCTTCT CTGCTACTAA TGCTTATTAC GATGTAGCAT TACAACGGAT GGAAGAGCTA AAAGAAGAAG AAATACCGGG ATATATAACC TTGCAAGAAT TTTTAATGCG TAGGATTACA CCTGCAGTTA AAACCTGCCA AACGGCTTCG AACCACTTAG AAGATATTTC TAGAAGAGTC ACCCGCGCTA GTGAGTTATT GCGCACACGC GTTGATATGG TATTACAAGA GCAAAATCAA ACCTTATTAA AGTCAATGAA CCACCGTGCA CATGTGCAAA TGCGACTGCA ACAAACGGTT GAAGGCTTAT CAGTTGCCGC GATAAGTTAT TACGGCATGC AATTATTTGA AACCATGTTA ACGTCTTTAC CAACACTAGG TATTGACTAT AACCATGAAC TAGTGAGTGG CTTTGCGGTA CCTATTGTTA TTGGTATTGT TTTTGTTGTC ACACGCTTAG TGCATAAGCG CTTAATGAAG GATTTAAAGT AA
|
Protein sequence | MESRALLTKL ISNELSESDV LPSSLLSKIA THPLREKLYN ELHNRPFPSI SSPAQLTHIA IQHQGKLKQE EHEFISLLCN KFQVNSPAKS MPCFYQDFGL FSLRWERHLE YSTYTFIHQA PLTDQPFIKN AIDYVPSNWL EKMPGQVIAA VHLIIEPENI DQEITHKVEK YFDNMSLIAS APVNSQAKVW SSFKLHNDGF GRFLIYQQDL SAAQLGRLTQ QLLQLDTYRL MATLGLPLAR VINSELNQLD LQLQQVTTYI ALGTDKSDRE LLTQVSKIAA KVEDYRSQST YRFSATNAYY DVALQRMEEL KEEEIPGYIT LQEFLMRRIT PAVKTCQTAS NHLEDISRRV TRASELLRTR VDMVLQEQNQ TLLKSMNHRA HVQMRLQQTV EGLSVAAISY YGMQLFETML TSLPTLGIDY NHELVSGFAV PIVIGIVFVV TRLVHKRLMK DLK
|
| |