Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2044 |
Symbol | argE2 |
ID | 3520278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2118199 |
End bp | 2119377 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284504 |
Product | acetylornithine deacetylase |
Protein accession | YP_268772 |
Protein GI | 71279817 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.234319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA CTCAACTTCA AACGCCAAAA AGTTTGGCGT TAATAGAAAA ATTAATTAGT TTTGATACTA CCAGTTATAA ATCAAACTTA GACTTGATTG AGTATATACA AAATTATTTA AGTGAATACG GTATCAGCTC ACAGTTAGCT TTTAATGAAG AAAAAACCAA AGCTAACCTA TACGCAACTA TCGGCCCACA AGATAAATCA GGGGTAATGC TGTCAGGTCA TACTGATGTT GTACCTGTGA CTGGCCAAGC ATGGGATACC GACCCTTTTT GCGTAACGCA CAAAGACGGT ATGTTATTTG GCCGCGGTAC ATGTGATATG AAAGGCTTTA TTGCAATTGT TTTAAGTTAT TTGCCTGAAA TGATTGCAGC AAAACTTGAA ACCCCAGTAC ATTTAGCGTT TTCTTATGAT GAAGAAATTG GCTGTGTAGG TGCTAGGCGT TTAGTAGAGA TGATGTCAGG CATGCCAATT AAACCAGCGA TGTGTATTGT TGGCGAGCCT ACGAGCTTGC AAGTCGTTAA TGCACATAAA GGTAAATTAG CACAACGTAT AACAGTTAGT GGCTTAGAGG CACACTCTAG TTTGCCGCAC TTAGGTGTTA ATGCCATTGA TTTTGCCGCA GATCTAATAC TTTTCATTCG AGAGTTAGCA CGTGAGTTAG CAGAAAATGG ACCTTTTGAA GAAGGCTTTG ATGTAACTTA CACTACGTTG CATACCGGAA AAGTCGAAGG TGGCGTGGCG TTAAATATTG TTCCTAAACA TTGCCAGTTT GATTTTGAAA TACGTAATAT TCCGGGACAA GACCCTCAAC CTTTACTAGA TAAAGTAATG GCTTATGCTA AAGACGTACT TGAGCCAAAA ATGAAAGCAG TTGATGCTAA CTGTAGCATT GAAATGTCAC CGCTTTCTGG TTATCCCGGT ATGTTTACTG AAGAAGAGAA AGAAGTCGTT GAGTTTGTGC AAACGCTAAC GGAAGTTAAA GGCTTGAAAA AGATAACCTT TGGTACTGAA GGCGGATTAT TTACCAATGC TCTACATATA CCAACAGTGG TATGTGGCCC TGGCAGCATT GAGCAAGCAC ATAAACCTAA TGAATTTATT GAGGTAGCAC AGGTACTCGC TATGGAAAGT TTTATGGATA AACTGATCAC AGCATTATCG CCATCATAA
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Protein sequence | MNITQLQTPK SLALIEKLIS FDTTSYKSNL DLIEYIQNYL SEYGISSQLA FNEEKTKANL YATIGPQDKS GVMLSGHTDV VPVTGQAWDT DPFCVTHKDG MLFGRGTCDM KGFIAIVLSY LPEMIAAKLE TPVHLAFSYD EEIGCVGARR LVEMMSGMPI KPAMCIVGEP TSLQVVNAHK GKLAQRITVS GLEAHSSLPH LGVNAIDFAA DLILFIRELA RELAENGPFE EGFDVTYTTL HTGKVEGGVA LNIVPKHCQF DFEIRNIPGQ DPQPLLDKVM AYAKDVLEPK MKAVDANCSI EMSPLSGYPG MFTEEEKEVV EFVQTLTEVK GLKKITFGTE GGLFTNALHI PTVVCGPGSI EQAHKPNEFI EVAQVLAMES FMDKLITALS PS
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