Gene CPS_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2015 
Symbol 
ID3519807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2088172 
End bp2089344 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content36% 
IMG OID637284477 
Productphage integrase family site specific recombinase 
Protein accessionYP_268745 
Protein GI71279352 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGT CCGATACCAA ACTACGAAAA ATAAAAGCAC CATATAATGG AGAGGCAGAA 
CTAGCCGATA GAGATGGTTT ATCTGTAAGA GTCAGTCCTA AAGCACTAAT AACTTTCAAT
TATCGCTTTA GATGGGAAGG TAAGCAACAA AGAATTAAAC TTGGTCGATA TCCAGGCTTG
AAACTAATTG ATGCAAGAAA AAAAGTTAAT GAATATCGGC ATAATTTAGA TGAAGGTCTA
GACCCAAGGG TGGTTCAGAA TGAAAGTCGG AGCCACAATT TATTTGGTGA TATGTGTGAA
GCATTCATGA CTAAGTATGT TATGACAGAA TTACGGCCTA AAACACAAAC ATTATATAAA
TCTACTTTTA ATAAATATGT CACACCTTAT AAAAACATTG ATATTGAACG ATATAAATAT
ACCGATTGGA TCGCTTACTT TGATTGGGTT AAAAAGGAGT CCAGCTCAGC TAATGCAGGT
AGTGTTTTAA AACGATTTAA AGCTGTAGCG AATTGGGCGA AAGCTAGAGG TCAAATCAAA
CATTCTCATT TAATTGATAT CCCGATAAAA GCAATTGGTA GTCATCAACA AAAAAGAGAA
CGTTGCTTAG AGTGGGATGA GGTCATTGGC TTATGGCGAC AAATAGAATC AAGCAAATCA
ACACCGCAAT GTAAAACCTG TATCCAACTT CTTTTATTAA CGGGTGCAAG AAATGCTGAA
ATCCGTGAAG CGAGAAGGGA TGAGTTTGAT TTAGATAAAA ACATTTGGCT TTTACCTCCA
GAAAGATCAA AGACTAAAAA ACAAGTTCGT CGCCCATTGA GTACTGGAGT AATTGAGCTA
ATTAATAAGC TCGATCTTAT ATACGGCCAA GACCGAGAAT ATTTAATCGC TGGCGATATA
AAAGGTAAGC CGTTAACTAC GCACGCTGTG AATCGTTTTG TGCAACGCAT GAATAATCAT
TTGAAATATC CACATTTTGT ACCTCATGAC TTTCGCCGTA CGATAGTCAC TAGATTAAGT
GAACATAAAG TTGAATTACA TGTTACTGAA AAAATGCTAG GTCATGAATT AGGAGGGATT
TTAACTCGTT ACAATAAACA TGATTGGATT GATGAGCAAC GCGAAGCTTA TGAATTATAT
TGGCAGAAAG TCACACTATT GTTAAAAAAC TAA
 
Protein sequence
MALSDTKLRK IKAPYNGEAE LADRDGLSVR VSPKALITFN YRFRWEGKQQ RIKLGRYPGL 
KLIDARKKVN EYRHNLDEGL DPRVVQNESR SHNLFGDMCE AFMTKYVMTE LRPKTQTLYK
STFNKYVTPY KNIDIERYKY TDWIAYFDWV KKESSSANAG SVLKRFKAVA NWAKARGQIK
HSHLIDIPIK AIGSHQQKRE RCLEWDEVIG LWRQIESSKS TPQCKTCIQL LLLTGARNAE
IREARRDEFD LDKNIWLLPP ERSKTKKQVR RPLSTGVIEL INKLDLIYGQ DREYLIAGDI
KGKPLTTHAV NRFVQRMNNH LKYPHFVPHD FRRTIVTRLS EHKVELHVTE KMLGHELGGI
LTRYNKHDWI DEQREAYELY WQKVTLLLKN