Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2015 |
Symbol | |
ID | 3519807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2088172 |
End bp | 2089344 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284477 |
Product | phage integrase family site specific recombinase |
Protein accession | YP_268745 |
Protein GI | 71279352 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTTGT CCGATACCAA ACTACGAAAA ATAAAAGCAC CATATAATGG AGAGGCAGAA CTAGCCGATA GAGATGGTTT ATCTGTAAGA GTCAGTCCTA AAGCACTAAT AACTTTCAAT TATCGCTTTA GATGGGAAGG TAAGCAACAA AGAATTAAAC TTGGTCGATA TCCAGGCTTG AAACTAATTG ATGCAAGAAA AAAAGTTAAT GAATATCGGC ATAATTTAGA TGAAGGTCTA GACCCAAGGG TGGTTCAGAA TGAAAGTCGG AGCCACAATT TATTTGGTGA TATGTGTGAA GCATTCATGA CTAAGTATGT TATGACAGAA TTACGGCCTA AAACACAAAC ATTATATAAA TCTACTTTTA ATAAATATGT CACACCTTAT AAAAACATTG ATATTGAACG ATATAAATAT ACCGATTGGA TCGCTTACTT TGATTGGGTT AAAAAGGAGT CCAGCTCAGC TAATGCAGGT AGTGTTTTAA AACGATTTAA AGCTGTAGCG AATTGGGCGA AAGCTAGAGG TCAAATCAAA CATTCTCATT TAATTGATAT CCCGATAAAA GCAATTGGTA GTCATCAACA AAAAAGAGAA CGTTGCTTAG AGTGGGATGA GGTCATTGGC TTATGGCGAC AAATAGAATC AAGCAAATCA ACACCGCAAT GTAAAACCTG TATCCAACTT CTTTTATTAA CGGGTGCAAG AAATGCTGAA ATCCGTGAAG CGAGAAGGGA TGAGTTTGAT TTAGATAAAA ACATTTGGCT TTTACCTCCA GAAAGATCAA AGACTAAAAA ACAAGTTCGT CGCCCATTGA GTACTGGAGT AATTGAGCTA ATTAATAAGC TCGATCTTAT ATACGGCCAA GACCGAGAAT ATTTAATCGC TGGCGATATA AAAGGTAAGC CGTTAACTAC GCACGCTGTG AATCGTTTTG TGCAACGCAT GAATAATCAT TTGAAATATC CACATTTTGT ACCTCATGAC TTTCGCCGTA CGATAGTCAC TAGATTAAGT GAACATAAAG TTGAATTACA TGTTACTGAA AAAATGCTAG GTCATGAATT AGGAGGGATT TTAACTCGTT ACAATAAACA TGATTGGATT GATGAGCAAC GCGAAGCTTA TGAATTATAT TGGCAGAAAG TCACACTATT GTTAAAAAAC TAA
|
Protein sequence | MALSDTKLRK IKAPYNGEAE LADRDGLSVR VSPKALITFN YRFRWEGKQQ RIKLGRYPGL KLIDARKKVN EYRHNLDEGL DPRVVQNESR SHNLFGDMCE AFMTKYVMTE LRPKTQTLYK STFNKYVTPY KNIDIERYKY TDWIAYFDWV KKESSSANAG SVLKRFKAVA NWAKARGQIK HSHLIDIPIK AIGSHQQKRE RCLEWDEVIG LWRQIESSKS TPQCKTCIQL LLLTGARNAE IREARRDEFD LDKNIWLLPP ERSKTKKQVR RPLSTGVIEL INKLDLIYGQ DREYLIAGDI KGKPLTTHAV NRFVQRMNNH LKYPHFVPHD FRRTIVTRLS EHKVELHVTE KMLGHELGGI LTRYNKHDWI DEQREAYELY WQKVTLLLKN
|
| |