| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2013 |
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| Symbol | dctD |
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| ID | 3520238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2085077 |
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| End bp | 2086438 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284475 |
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| Product | C4-dicarboxylate transport transcriptional regulatory protein |
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| Protein accession | YP_268743 |
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| Protein GI | 71279777 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.618445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACGG AAAAATTGGG TGTTGTCTTT GTTATCGATG ATGAAGAACA TATTCGAAGC
GCTATTGAGC AAACATTCGA ATTAAGAAAT TTTGAAGTGC AAACCTTTTC ACAAGCGCAT
CAATTACTTA ATCAGCTAAG TGATACTTGG CCTGGCGTGG TTATTAGTGA TATTAATATG
CCTAAAATGG ATGGACATCA GTTGATGGCT GAGGTCAAAA ATATTGACTC AGAGTTATCC
ACGATTTTAC TCACCGGTTT TGGTGATATT TCAATGGCAG TAAAAGCAAT GCGCAATGGT
GCTTACGACT TTATTGAAAA GCCATTTAAT AATGATGACC TAGTTGATAC GGTTAAAAGA
GCGCTAGATA AACGCTCTTT AGTGCTTGAA AATAGGCAAC TCAAAAAAGA AATAGAAACA
CATTGTTTAC CAGGTCCCAG AATATTAGGG AATTCGCCTA ACATTGTGCA AATGCGCAAT
ATACTCAATC AAGTGATGGA TGCACCTGCA GATATAATGA TCGATGGTGA AACCGGTACT
GGAAAAGAGT TAGTCGCTCG TTATTTACAC GACCATAGTA TTCGAAGAGA TAGTAATTTT
GTTGCACTTA ACTGTGGTGC AATCCCAGAA AATATTATTG AAAGTGAGCT ATTTGGTGCG
GAGAAGGGCG CTTATACGGG CGCTGATAAA AAACGCATTG GTAAGTTTGA ATACGCTAAC
GGTGGTACCT TGTTTCTTGA TGAAATAGAA AGTACTCCAA TGGCCTTACA AGTCAAACTC
TTAAGAGTAT TAGAAGAAAG AAAAGTGGTT CGTTTAGGTG CTAACGAAGG TGTTGAGCTT
GATGTCAGAG TGATTGCTGC GACCAAGGTA GATTTATTAG AGTTATGCGA GCAAGGTTTG
TTTCGTGAAG ATCTATATTA CCGTTTGAAT TTAGTAAAAG TAGATATTCC TCCCTTGAGA
GAACGTATTG AAGATGTGCC TTTGCTTTTT TTACACTTTG CTAGAATAGC TTCAGCGCGT
TATAAAAAAG AATTAATTCC ATTATCACAA GAGCATAAAG CACAACTGTT AAGTTATGGC
TGGCCTGGCA ATGTAAGAGA ATTACGTAAC TTGGCTGAGC GTTACATTTT ATTGGGTGAG
GCGGCAGCGT TTAATCTTAA AAAGAATACC AGCGCTAATT CAATGAACAG CAGTATGGGC
TTGACTCAAC GGGTTGAATT TTTTGAGAAG TTTCTTATCG AGGAAGCGTT GGCAAGTAAT
GAAGGCTGTA TTAAAGACAC CATGGAAGAG CTCAATTTAG CCAGAAAAAC ACTCTACGAT
AAAATGAAAA AATATGAATT AGAGCGAACA ACTTACCAAT AA
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| Protein sequence | METEKLGVVF VIDDEEHIRS AIEQTFELRN FEVQTFSQAH QLLNQLSDTW PGVVISDINM
PKMDGHQLMA EVKNIDSELS TILLTGFGDI SMAVKAMRNG AYDFIEKPFN NDDLVDTVKR
ALDKRSLVLE NRQLKKEIET HCLPGPRILG NSPNIVQMRN ILNQVMDAPA DIMIDGETGT
GKELVARYLH DHSIRRDSNF VALNCGAIPE NIIESELFGA EKGAYTGADK KRIGKFEYAN
GGTLFLDEIE STPMALQVKL LRVLEERKVV RLGANEGVEL DVRVIAATKV DLLELCEQGL
FREDLYYRLN LVKVDIPPLR ERIEDVPLLF LHFARIASAR YKKELIPLSQ EHKAQLLSYG
WPGNVRELRN LAERYILLGE AAAFNLKKNT SANSMNSSMG LTQRVEFFEK FLIEEALASN
EGCIKDTMEE LNLARKTLYD KMKKYELERT TYQ
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