| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2010 |
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| Symbol | |
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| ID | 3523292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2081714 |
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| End bp | 2082757 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284472 |
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| Product | porin |
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| Protein accession | YP_268740 |
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| Protein GI | 71278934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTG TTCAAGTGAA TAAAACAAGC AAACTATTTT TTTTAAACGT ACTGTTATTA
AGTTGTGCAA GCGCAAATGC AAGTGATGTT GAGAGTTCAT TCTATGGCTC GCTCCGTTTA
GGTGCCGACT ATGTTGATAG TGGTACTTCT GATGATGCTG CAAATGGTAG AGATTACTTA
AGTCGGATTG GTGTTAAGGC TGAAGTTCAA TTGGCTGACG GTTTAACAGG TGTAGGTAAA
GTTGAGTATG GTTTACGCGG GGATGATGGC GTTAATTTCA ATCAAAACCA AAAAGCCGGA
ATGCGACAGA TATATGTTGG CCTTAAAGGA AAGTTTGGTA CTGTTACCTA TGGCTCTCAA
ACCATTATAT GGCATCAGTA TGTGCGCAGT GCTTATTTTT CTGATGGATT AGACTCATTA
CGTCAAGGCG CTATTCGTGA TGATGATATG CTGCAATGGC AAAAAACTTA CAATAATTGG
AAATTTGGTG CAGCTATTCA AACAGAGAAG CAAGATGGTG ATTCTATTGA TCAATACCAA
GTAGCAGCAC AATATAAAAA CCAAAAATTG AAACTTCAAG CAGCATTAGC AGCAGACCAA
CAGGGTGAAA ATACCGGTAA TTTATATGGC TTTCGTGCTT GGTATGATAT TTCAAAAGCG
TTTACCGTAT CAGCCTTTTA TCATTTAGCT GAAGAAGATT TTGATCTTTA TAAAGGTAAC
TCTTCTGGTA ACGTGAGGTT AGTCTCAGCA GAAGAATCTG GTAAAGTAGG CGGCGTAACC
GCATGTGTTG ATGAAGATCG TTCAACTGTA GGTTTATATG GCAAGTGGCG TCAAGACAAC
AATCAAGTCC ATGCTAGATA TGCGGTAAAC TCTTGTGACA TAAAAGGCGA TGTTAGCTCT
ATTAAAGTTG AATATATTCG TTACTTCTCT AAGAAGTTTC GCATGTGGGC ATCATTTGAG
CAGTTAGATA ATGATACAAC ACGTTTACCT TCAACAGGAG AAGACATGTC GGAAGCACAA
GTAGGTGTAA GATTCGATTT TTAA
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| Protein sequence | MKRVQVNKTS KLFFLNVLLL SCASANASDV ESSFYGSLRL GADYVDSGTS DDAANGRDYL
SRIGVKAEVQ LADGLTGVGK VEYGLRGDDG VNFNQNQKAG MRQIYVGLKG KFGTVTYGSQ
TIIWHQYVRS AYFSDGLDSL RQGAIRDDDM LQWQKTYNNW KFGAAIQTEK QDGDSIDQYQ
VAAQYKNQKL KLQAALAADQ QGENTGNLYG FRAWYDISKA FTVSAFYHLA EEDFDLYKGN
SSGNVRLVSA EESGKVGGVT ACVDEDRSTV GLYGKWRQDN NQVHARYAVN SCDIKGDVSS
IKVEYIRYFS KKFRMWASFE QLDNDTTRLP STGEDMSEAQ VGVRFDF
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