Gene CPS_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2002 
Symbol 
ID3521370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2071854 
End bp2072618 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content39% 
IMG OID637284464 
Producthypothetical protein 
Protein accessionYP_268732 
Protein GI71280901 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAT TTCTTCTTAA AAAGATCATC ACTGTATTGA GCATGCCCAT CAATATAGTG 
CTGTTATTAC TTATTTTTGC CCTCGTTGTT CATCGTAAAA AGCCTAAACA AAGTATTAAG
AGCCTATCAA CTGCTATAGT CATTCTACTT ATCAGCGCCT TCGCACCTTT TTCAGATACG
GTTATGACCG CTATTGAAAA TGATTACCCG CCTTATGTTA AAACAAACGT GTCTGTCGAT
TACATTGTGG TATTAGGTTG CGGCCATAAT ACCAACGCTG AGTTGCCGGT AACTAGCCAA
CTAAAAACTT GTTCGTTACA ACGAATGGTT GAAGCAGTAC GTATTTATCA ACTACATCCA
GAAGCCAGAA TAATCACCTC AGGTTATGGC GGACATAATC CTGTATCTAA TGCGGAAACG
GTAAAGCAAT CATTGATACT TTTAGGCGTT CCGGCGCAAA AAATTATTAC TGAAAATTTT
CCAAAGGATA CTGAAGAAGA AGCACAACTC ATTGCGCCGC GAGTACAAGG CACCCAAGTG
ATACTGGTGA CAAATGCTGA CCATATGCCG CGATCTATCA ATTATTTCCA AGCAGAAGGA
ATATACCCTA TTGCTGCACC GACTGGCTAT TGGGTAAAAA ATCCAGACAG TAGTAAAAGC
TGGGTTCATT ACATACCTAC GAGTAAGAAG TTAGAACAAA CCACTATTGC TTGGTATGAG
AGTTTAGGGC TGATAGTGCA ATGGTTTAAA TCACTCTTTA GCTAA
 
Protein sequence
MDLFLLKKII TVLSMPINIV LLLLIFALVV HRKKPKQSIK SLSTAIVILL ISAFAPFSDT 
VMTAIENDYP PYVKTNVSVD YIVVLGCGHN TNAELPVTSQ LKTCSLQRMV EAVRIYQLHP
EARIITSGYG GHNPVSNAET VKQSLILLGV PAQKIITENF PKDTEEEAQL IAPRVQGTQV
ILVTNADHMP RSINYFQAEG IYPIAAPTGY WVKNPDSSKS WVHYIPTSKK LEQTTIAWYE
SLGLIVQWFK SLFS