Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2002 |
Symbol | |
ID | 3521370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2071854 |
End bp | 2072618 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284464 |
Product | hypothetical protein |
Protein accession | YP_268732 |
Protein GI | 71280901 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAT TTCTTCTTAA AAAGATCATC ACTGTATTGA GCATGCCCAT CAATATAGTG CTGTTATTAC TTATTTTTGC CCTCGTTGTT CATCGTAAAA AGCCTAAACA AAGTATTAAG AGCCTATCAA CTGCTATAGT CATTCTACTT ATCAGCGCCT TCGCACCTTT TTCAGATACG GTTATGACCG CTATTGAAAA TGATTACCCG CCTTATGTTA AAACAAACGT GTCTGTCGAT TACATTGTGG TATTAGGTTG CGGCCATAAT ACCAACGCTG AGTTGCCGGT AACTAGCCAA CTAAAAACTT GTTCGTTACA ACGAATGGTT GAAGCAGTAC GTATTTATCA ACTACATCCA GAAGCCAGAA TAATCACCTC AGGTTATGGC GGACATAATC CTGTATCTAA TGCGGAAACG GTAAAGCAAT CATTGATACT TTTAGGCGTT CCGGCGCAAA AAATTATTAC TGAAAATTTT CCAAAGGATA CTGAAGAAGA AGCACAACTC ATTGCGCCGC GAGTACAAGG CACCCAAGTG ATACTGGTGA CAAATGCTGA CCATATGCCG CGATCTATCA ATTATTTCCA AGCAGAAGGA ATATACCCTA TTGCTGCACC GACTGGCTAT TGGGTAAAAA ATCCAGACAG TAGTAAAAGC TGGGTTCATT ACATACCTAC GAGTAAGAAG TTAGAACAAA CCACTATTGC TTGGTATGAG AGTTTAGGGC TGATAGTGCA ATGGTTTAAA TCACTCTTTA GCTAA
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Protein sequence | MDLFLLKKII TVLSMPINIV LLLLIFALVV HRKKPKQSIK SLSTAIVILL ISAFAPFSDT VMTAIENDYP PYVKTNVSVD YIVVLGCGHN TNAELPVTSQ LKTCSLQRMV EAVRIYQLHP EARIITSGYG GHNPVSNAET VKQSLILLGV PAQKIITENF PKDTEEEAQL IAPRVQGTQV ILVTNADHMP RSINYFQAEG IYPIAAPTGY WVKNPDSSKS WVHYIPTSKK LEQTTIAWYE SLGLIVQWFK SLFS
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