| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1995 |
|---|
| Symbol | ccoN |
|---|
| ID | 3519145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2063820 |
|---|
| End bp | 2065244 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637284457 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit I |
|---|
| Protein accession | YP_268725 |
|---|
| Protein GI | 71278226 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.833948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA GTAATACGTC AGCAGTAGAC TACAACTTCG ATGTTGTACG TCAGTTTACT
GTAATGACTG TAATCTGGGG AATCGTGGGT ACACTAGTAG GTGTACTTAT CGCGGCACAA
TTAATTTGGC CTGCGTTAAA TTTTGATACA CCTTGGTTAA CCTACTCCCG TCTTCGTCCA
CTTCATACTA ATGCTGTAAT TTTTGCTTTT GGTACAAGTG CTTTATTTGC CACGTCTTAT
TACGTTGTGC AACGTACCTG TCAAACGCGT CTATTTGGCG GTAAATTAGC AGCCTTTACC
TTTTGGGGTT GGCAAGCTGT TATCGTTGCA GCGGCTATCT CGTTACCTTT AGGTTATACC
TCTACTAAAG AGTACGCAGA GCTAGAATGG CCAATCGACA TTCTTATTGC TGTTGTTTGG
GTTTCGTACG CCATCGTCTT CTTTGGTACC TTAGTTAAAC GTAAAACCTC GCATATTTAC
GTAGCTAACT GGTTCTTTGG CGGCTTTATC GTTACCGTTG CTGTGTTGCA TATCGGTAAC
TCAATGGTTA TACCTGTTTC GGCAATGAAA TCATACTCAC TCTATTCTGG CGCTATTGAT
GCCATGATGC AGTGGTGGTA TGGACATAAT GCCGTTGGTT TCTTATTAAC TGCTGGTTTC
TTAGGTATGA TGTATTACTT CGTACCAAAA CAAGCTGAAC GTCCTGTATA TTCTTATCGT
TTATCTATTG TTCATTTTTG GGCATTAATT TCTTTATATA TTTGGGCTGG TCCTCATCAC
TTACATTACA CTGCACTTCC TGATTGGGCT CAGTCAGTTG GTATGGTAAT GTCTATCGTA
TTATTCCTTC CTTCATGGGG TGGTATGATC AACGGTATCA TGACGCTTTC TGGCGCATGG
CATAAACTTC GTAGTGATCC TATTTTACGC TTCTTAATTG TTTCATTATC TTTCTACGGT
ATGTCTACCT TTGAAGGCCC GATGATGGCA ATAAAATCAG TTAATGCCTT ATCTCATTAT
ACTGACTGGA CTGTTGGTCA CGTACATTCT GGTGCTCTTG GTTGGGTTGC TATGGTTTCA
ATTGGTGCTA TGTACCACTT AATCCCAATC TTGTTTAACC AAGGCCGTAT GTACAGCATG
CGCCTTATCA ACATTCATTT CTGGTTGCAC ACTGCGGGTA TCGTACTTTA TATCGTAGCT
ATGTGGATTT CAGGTGTAAT GCAAGGGTTA ATGTGGAGAG CTGTGAATAG CGACGGTACA
TTAACATACA GCTTTGTTGA GAGTTTAACC GCTTCTTACC CATTCTATTT CATCCGCTTC
TTAGGTGGTG TATTAGTGGT AACTGGTTTC TTATTAATGG CTTACAACAT GTTTAAAACA
ATTGGTGCTA AAGACGGAAG TCTTAAGCCT CTTGAAGTAG CTTAA
|
|---|
| Protein sequence | MTTSNTSAVD YNFDVVRQFT VMTVIWGIVG TLVGVLIAAQ LIWPALNFDT PWLTYSRLRP
LHTNAVIFAF GTSALFATSY YVVQRTCQTR LFGGKLAAFT FWGWQAVIVA AAISLPLGYT
STKEYAELEW PIDILIAVVW VSYAIVFFGT LVKRKTSHIY VANWFFGGFI VTVAVLHIGN
SMVIPVSAMK SYSLYSGAID AMMQWWYGHN AVGFLLTAGF LGMMYYFVPK QAERPVYSYR
LSIVHFWALI SLYIWAGPHH LHYTALPDWA QSVGMVMSIV LFLPSWGGMI NGIMTLSGAW
HKLRSDPILR FLIVSLSFYG MSTFEGPMMA IKSVNALSHY TDWTVGHVHS GALGWVAMVS
IGAMYHLIPI LFNQGRMYSM RLINIHFWLH TAGIVLYIVA MWISGVMQGL MWRAVNSDGT
LTYSFVESLT ASYPFYFIRF LGGVLVVTGF LLMAYNMFKT IGAKDGSLKP LEVA
|
|---|
| |