Gene CPS_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1988 
Symbol 
ID3518455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2057657 
End bp2058406 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content41% 
IMG OID637284450 
Producthypothetical protein 
Protein accessionYP_268718 
Protein GI71279015 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAG ATGTTTTTTC TGCCTTTATC ATTGGTTTGC TTGGCTCTGG TCATTGCTTA 
GCTATGTGTG GTGGTATAAC TACCCTGCTG ACTTCTGCTA TTAATAAACC GTCAAATTTG
CCAACCACTA AAGAAAGCCT GCAAGGCGAC ATTCCTGTCA ACGTAACCTC AGCACCATCA
GGTTGCTCGC CCCAAGCTTC CCGTTTAAAT CTAGTCTTCT TATATCATGT TGGGCGCATT
GCTAGTTATT GCCTAATTGG CGCAATTGTA GGTTTTACTG GCTCTATCGC CGCTAAAAAT
GTAGGTTTAC CTATTGCAGG GTTACGCCTA GTTGCGGCAC TTTTTCTTAT TCTTTTGGGC
CTTTATATAG GTCAGTGGCT TTTATGGTTA AATAAGATTG AATCTTTGGG CAAAGGTTTA
TGGCGCTATT TATCTCCTTT AGCTAAACAT GTCATCCCAG TGGATACTCC TAAAAAAGCG
TTAGGTTTAG GGGCTTTGTG GGGTTGGTTA CCTTGTGGTT TGGTGTATTC GACACTCACT
TGGGCACTTG CCAGTGGTAG TATTTTAACT GGTGCAGCTA TTATGCTTTG TTTCGGACTA
GGTACTTTAC CCGCATTAAT TGCTTTATCC CTAGGTATCG ACAGCATAAA AAATCTACTA
GTCAATAAAG TCTTTCGAAA AATGATGGCT ATTTCTCTTA TTACCTACGG TATCTACAGT
TTTGTTGTTG CATATCAAGT AATGTTCTAA
 
Protein sequence
MSLDVFSAFI IGLLGSGHCL AMCGGITTLL TSAINKPSNL PTTKESLQGD IPVNVTSAPS 
GCSPQASRLN LVFLYHVGRI ASYCLIGAIV GFTGSIAAKN VGLPIAGLRL VAALFLILLG
LYIGQWLLWL NKIESLGKGL WRYLSPLAKH VIPVDTPKKA LGLGALWGWL PCGLVYSTLT
WALASGSILT GAAIMLCFGL GTLPALIALS LGIDSIKNLL VNKVFRKMMA ISLITYGIYS
FVVAYQVMF