| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1978 |
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| Symbol | deoD |
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| ID | 3522526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2047665 |
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| End bp | 2048369 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284440 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_268708 |
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| Protein GI | 71282054 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.331725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACAC CACATATCGA AGCACAAGAC GGCGAATTTG CAGAAACAGT ACTAATGCCT
GGCGATCCAC TTAGAGCAAA ATTTATTGCC GATAACTTTC TAGACGATGC TAAATGCATT
ACACAAGTAC GCAATATGCT TGGTTACACA GGTACGTATA AAGGTAAGCG TGTCTCTGTA
ATGGGCTCAG GTATGGGCGT ACCAAGCATA TCTATTTACG CTACTGAACT TTATAAAGAT
TATGGCGTTG AAAAAATCAT ACGCATCGGC TCTTGTGGCG CAGTAAGAGA TGATATAAAG
ATTCGTGATA TTGTTATTGG TATGGCGGCG AGCACAGACT CAAACGTTAA CAGACAACGT
TTTCACAATG TAGATTTTGC TGCTTGTGCC GACTTCTCTT TATTAAAAAG TGTCGTTGAT
ACCGCTGAAA AACTCGGTAA ACCTGTACAT GTAGGTAATA TTTTTACTGC TGATTTATTT
TATACGCCGC AACCTGAAAA GTTTGCAACC ATGGAAAAGT ATGGAATTTT AGCGGTAGAA
ATGGAAGCAG CCGGCCTTTA TGGTGTTGCT GCTGAATATG GTAAAAAAGC ACTTACCGTA
TTGACCGTTA GTGATCATAT AAAAACAGGT GAGAAAACTA CTTCTGAAGA AAGAGAAACT
ACGTTTAAAG ATATGATGGA ACTTACATTA GAAAGCGTAC TATAG
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| Protein sequence | MPTPHIEAQD GEFAETVLMP GDPLRAKFIA DNFLDDAKCI TQVRNMLGYT GTYKGKRVSV
MGSGMGVPSI SIYATELYKD YGVEKIIRIG SCGAVRDDIK IRDIVIGMAA STDSNVNRQR
FHNVDFAACA DFSLLKSVVD TAEKLGKPVH VGNIFTADLF YTPQPEKFAT MEKYGILAVE
MEAAGLYGVA AEYGKKALTV LTVSDHIKTG EKTTSEERET TFKDMMELTL ESVL
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