| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1977 |
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| Symbol | |
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| ID | 3523248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2045268 |
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| End bp | 2047577 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284439 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268707 |
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| Protein GI | 71277841 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.357712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT TTAAAAAAAG CGTATTGTCA CTTTGTGTGC AGGCGTCAAT CATTGCGAGC
GTTACTGGTT TCTCTGCTAG TGCCCTAGCA GCAGAAGAAG TGGATAAGAA TAAGCTAGAA
GTCATTGAGG TTACTGCACG TAAACGTGTT GAAAATGTTC AAGAAGTTCC GGTTTCTGTC
TCTTCTTTAC AAGGTGAAAA TCTTGATGCT TACAGCTCTG GGGGGATGGA TATTCGCTTT
ATGAGTGCTC GTATTCCAAG TCTTGCGGTA GAGTCCTCAT ATGGACGAAG CTTTCCCCGA
TTTTATATTC GTGGTTTAGG TAATACTGAT TTTGACTTAA ATGCTTCACA GCCTGTTTCC
TATGTCGTGG ATGATGTTGT TCAAGAAAAT CCAATTTTAA AAGGTTTTCC TGTCTTTGAT
GTAGAAAGAG TCGAAGTGCT TCGTGGGCCT CAAGGAACGT TGTTTGGACG TAATACGCCA
GCTGGCTTAG TTAAGTTTGA TTCAATGAAG CCAACACAGT CTTTTGATGG TTATGCTGCA
ATTTCTTATG GTACTCGTGG CGCAATTGAT TCATCAGGCG CAATTGGTGG TGGTTTAACT
GATAATTTAT CAGTTCGGGT GTCTGCTCTG CATCAATCAA AGGGTGACTA TATCGATAAT
AGAGCAGTTG GCTTTGAGAA AAAAGACCAA TTAGGTGGTT ATGATGATAA TGCTGCCCGT
ATTCAGTTTT TATATGAAGG TAGTGCTTTT AGCGCATTGT TTAATTATCA TTTTAGAGAC
CTTGATGGCT CGCCTATTGT TTTTCATCCC AATATTGCTA CTCCTGGGAC TAATAATATT
CGCGGTGACT TTGAAGCTGA TGTCGTTTAT CAAGATGCAG GTCAATTTGC AACTCAGGAT
GTATCAACTC AAGGTAGTAG TTTAAAGCTT GAGTGGGATA TTGATGATTA CACTGTAACG
TCTATCACGG CTTGGGAAAG CGCTGAGATA TTTTCTAGAG CTGATGTTGA TGGCGGCTAT
AACGGTTTTC CTCCTGCAGG TGATGCCAAT GCAGTATGGT GGGGGGCTCA AACAGCGGAT
GAAATTCCTG AGCATGATCA ATATACGCAA GAGCTTCGTT TAGCTTCCAA TTTTGCAGGT
AAGCTTAATT ATCAAGTGGG TCTTTTCTAC TTTAGTGAAG AATTAATTAT TAATACTTAT
GATTATTTTA CTCGAGATGG TACATCAACA CCATCTGACC CAGCGCACGG CGCACAGAAC
GGTGAATCAA CACAGTATCA AGATACAACA GCTTGGGCAG TATTTGGCTC TGTTGATTAC
GATTTCACAG AAGACTTAGC AATAACAGTA GGCCTTCGTT ACTCTGACGA TCAGAAAGAC
TTTACGGCTG AGTTATTAGA TCATCCATTT ATACCAGGAG CAGATGGCGG TAATTTCTCT
GAGTCTGTTG ATGTAAGCGA TAGCCACGTA AGTTGGGATA TTAGCGGTAC TTATAAAATA
AACAAAAATA TAAATTGGTA TGCTCGTGTC GCCAATAGCT TTAGAGCACC AAGCATTCAA
GGTCGTGTGC TTTATGACCA AAATGTGAGT GTTGCTGATT CAGAAACGAT TACATCGTAT
GAAACTGGAT TAAAATCTGA TGTTTTAGAA GGGAGAGGTA GAGTTAATGC ATCCGTCTAT
TATTTTGATA TGAATGATCA ACAATTAACG GCAGTAGGTG GAACCTCGAA TTCAAACACA
TTGTTAAATT CAAATGGTAC TATCGGTTAT GGTATTGAGC TAGATTCAGA ATGGATTCTA
ACTGATAACA TTATTGCTAC TTTCAACATC AGCTACAATA AAACAGAAAT TGATGATGAC
GGTCTAGCCG TTGCGGCTTG TGGTTCTGGT ACATGTACTG TAACTGATCC AACCTTCCAA
GTTCCAGGCG ATTTTGGCCC AACTACTATG GCGTATATTG ACGGTAACAG CTTACCTAAT
GCACCTGAAT GGATTTCAAA CTTAACCTTA AGCTACGTAA AAGAGATTGG AGATGGAGAG
TTTTTTGCGC ATACTGATTT AACTTACCGT GGCAAAGTTG ATTTCTTTTT ATATAGAGCC
GAGGAGTTTG AAGGTGAAGC CTTAATAGAA GTTGGCGCAC GTACTGGTTA TAACTGGATT
TCTGGTGATA ATGAGTACGA AGTTTCAGCA TTTGTGCGTA ACCTTACCGA TGAGGAAGTG
ATTATTGGTG GTGTTGATTT CAATAATAAC TCAGGCATGG TTAACGAAGA GCGTTTTGTT
GGCGCAGCAT TTAAAGTGTC TTTCTTTTAG
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| Protein sequence | MKIFKKSVLS LCVQASIIAS VTGFSASALA AEEVDKNKLE VIEVTARKRV ENVQEVPVSV
SSLQGENLDA YSSGGMDIRF MSARIPSLAV ESSYGRSFPR FYIRGLGNTD FDLNASQPVS
YVVDDVVQEN PILKGFPVFD VERVEVLRGP QGTLFGRNTP AGLVKFDSMK PTQSFDGYAA
ISYGTRGAID SSGAIGGGLT DNLSVRVSAL HQSKGDYIDN RAVGFEKKDQ LGGYDDNAAR
IQFLYEGSAF SALFNYHFRD LDGSPIVFHP NIATPGTNNI RGDFEADVVY QDAGQFATQD
VSTQGSSLKL EWDIDDYTVT SITAWESAEI FSRADVDGGY NGFPPAGDAN AVWWGAQTAD
EIPEHDQYTQ ELRLASNFAG KLNYQVGLFY FSEELIINTY DYFTRDGTST PSDPAHGAQN
GESTQYQDTT AWAVFGSVDY DFTEDLAITV GLRYSDDQKD FTAELLDHPF IPGADGGNFS
ESVDVSDSHV SWDISGTYKI NKNINWYARV ANSFRAPSIQ GRVLYDQNVS VADSETITSY
ETGLKSDVLE GRGRVNASVY YFDMNDQQLT AVGGTSNSNT LLNSNGTIGY GIELDSEWIL
TDNIIATFNI SYNKTEIDDD GLAVAACGSG TCTVTDPTFQ VPGDFGPTTM AYIDGNSLPN
APEWISNLTL SYVKEIGDGE FFAHTDLTYR GKVDFFLYRA EEFEGEALIE VGARTGYNWI
SGDNEYEVSA FVRNLTDEEV IIGGVDFNNN SGMVNEERFV GAAFKVSFF
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