| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1976 |
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| Symbol | deoB |
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| ID | 3519460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2043891 |
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| End bp | 2045105 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284438 |
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| Product | phosphopentomutase |
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| Protein accession | YP_268706 |
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| Protein GI | 71279024 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0351038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTG CAATAATTAT AGTTATTGAT AGCTTGGGTA TCGGTTATTC TCCAGATGCT
GTTGATTTTG GTGATGTGGG CGCAAATACG TTTGCTAACC TAGCTCGTGC TTATTATGAA
GAAACAGGTA AAGAGATTTT CTTACCCAAC TTATCGGCAC TTGGAATGAT AAAGGCTTGT
GAACAAGCAT CTAATCAAAC ATTTCCTTAT CAGGGTCAAG AACCAAGTAA AGGTGCTTAT
GGTTTTGCAC AAGAAATAAG TACTGGTAAA GATACGCCCA GTGGTCACTG GGAGATGGCA
GGCGTACCTG TACTTTTTGA TTGGGGATAT TTTACCGATA AAAACAGTAG CTTTCCCACA
TCATTAATTG ACGATATTAA TCGTGAAACG GGTTTTGATG GCATATTAGG CAATTGTCAT
GCTTCAGGTA CCGAAATTCT TACCCGTTTA GGACAAGAGC ATATTGAAAC AGGTTTACCG
ATTTGTTATA CCTCGGCCGA TAGCGTTTTT CAAATAGCTG CGCATGAAGA ACATTTTGGT
TTAGATAACC TCTATAAATA CTGTGAAACG GTTCGAGAGT TACTTGGTGA TTTAAATATA
GGACGTGTTA TTGCTAGACC CTTTGTAGGA GATAGTGCTG ATAACTTTGC TAGAACAGGT
AACCGTAGAG ATTACTCAGT GTTACCGCCA GCTCCTACGG TACTTGATAA AATATCACAG
GAAGGAACTC ATGTTATCAG TGTTGGTAAA ATTGCTGATA TTTTCGCTCA TCAAGGCATT
GATGAAAAAA CAAAAGCGAC TGGGCTCAAT GCACTTTTTG ATGCCACTTT GGATCATATT
AATACCGCAC AAGACAATTC ACTCATTTTC ACTAATTTGG TTAATTTTGA TCAAGATTTT
GGTCATAGAC GCGATGCTAT CGGTTATGCA AAAGAGCTTG AAGCACTAGA TGTTCGTATA
CCTGAGCTCT TTCATGCGAT GTCTGCGGAG GATGTACTAT TCTTAACCGC TGATCATGGT
TGTGATCCAA CATGGCCTGG TACTGAGCAT ACTCGAGAGT ATGTACCTAT TATTGCTTAT
CATCATCAGA TTGACTCTGT AAACCTTGGT AACCGTAAGA CGTTCGCTGA TTTAGGACAA
AGTGTCGCCG AGTTATTTAA CGTAGAAGCA ATGGACTACG GCACAAGCTT TCTGTCAGAG
ATATACAGTA AGTAA
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| Protein sequence | MARAIIIVID SLGIGYSPDA VDFGDVGANT FANLARAYYE ETGKEIFLPN LSALGMIKAC
EQASNQTFPY QGQEPSKGAY GFAQEISTGK DTPSGHWEMA GVPVLFDWGY FTDKNSSFPT
SLIDDINRET GFDGILGNCH ASGTEILTRL GQEHIETGLP ICYTSADSVF QIAAHEEHFG
LDNLYKYCET VRELLGDLNI GRVIARPFVG DSADNFARTG NRRDYSVLPP APTVLDKISQ
EGTHVISVGK IADIFAHQGI DEKTKATGLN ALFDATLDHI NTAQDNSLIF TNLVNFDQDF
GHRRDAIGYA KELEALDVRI PELFHAMSAE DVLFLTADHG CDPTWPGTEH TREYVPIIAY
HHQIDSVNLG NRKTFADLGQ SVAELFNVEA MDYGTSFLSE IYSK
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