Gene CPS_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1974 
Symboludk 
ID3521056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp2043007 
End bp2043657 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content36% 
IMG OID637284436 
Producturidine kinase 
Protein accessionYP_268704 
Protein GI71280588 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.308367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACCAA TTAAACCAAC AATTATTGCT ATCGCTGGCC CTTCGGCCTC AGGCAAGACT 
CTTTTTGCCA AAACAATACA TGATGAGCTT ATTGATGAGC TTGGTGACAG TGGTATTTCT 
ATTATTTATG AAGATGCTTA TTATCGTGAC CAATCTCATT TGTCCATGCA AGAGCGTGAG 
CAAACTAACT ATGATCATCC CAGTGCATTT GAACACGAAC TTTTATCAGA GCACTTAAAA 
AAACTCACTG AAAATCAGAT GATTAATAGT CCTGTTTATT GTTACAAAAC TCATACCCGG 
CTCGATGAGA GTAAAAAGTT TTTACCCACT AAAATAATTC TAGTTGAAGG TATATTACTT 
TTATCTAACA AGGAATTAAG AGAGTGTTTT GACATTAAGG TCTACATGGA TACACCATTA 
GACATATGTC TCATTAGAAG AATTAAGCGA GATTTAGTTG AACGTAACCG CAGTATTGAA 
TCGGTCACTA ACCAATATTT AGCAACGGTT AGGCCAATGT ATTATCAATT TATTGAACCC 
TCTAAAGCTT GGGCTGATAT TGTTATTACC CGAGGAGGTA AAAATAGAAT GGCAATTGAG 
GTGATCAAAG CAAAAATTCG ACAACTTTCA CAATTACCCC CACAACAATA A
 
Protein sequence
MKPIKPTIIA IAGPSASGKT LFAKTIHDEL IDELGDSGIS IIYEDAYYRD QSHLSMQERE 
QTNYDHPSAF EHELLSEHLK KLTENQMINS PVYCYKTHTR LDESKKFLPT KIILVEGILL 
LSNKELRECF DIKVYMDTPL DICLIRRIKR DLVERNRSIE SVTNQYLATV RPMYYQFIEP 
SKAWADIVIT RGGKNRMAIE VIKAKIRQLS QLPPQQ