Gene CPS_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1956 
Symbol 
ID3523254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp2018687 
End bp2019310 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content41% 
IMG OID637284418 
Productputative RND efflux system protein 
Protein accessionYP_268686 
Protein GI71277847 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGTT GTTGTGCTGC AGAAGCAAAG AATGCCAGTG AAAGAAAACT ACTCTGGATT 
GTACTCATCC TTAATTTTAG TATGTTTGTT ATCGAATTTA TTGCCGGCTG GTTAGCCAAT 
TCTAGTGGAT TGCTTGCAGA TTCTTTAGAT ATGCTTGCCG ATGCTGCAGT GTACTCACTT 
AGCCTTTATG CGGTTGGTAA AAGTTTGTTG TATAAAGGTC GTGCGGCTTT GGCAAATGGC 
TATTTGCAGT TATCGCTTGG TTTACTCGTA TTAGTCGATG TCGCCAGACG CATCTGGCTT 
GGCAGTGAGC CTCAATCTGA GTTGATGCTT TCGATTGGTT TCATGGCCTT AATTGTTAAC 
ATGATTTGTT TTGTCCTCTT ATACCAGTTC AGACAAGGTG ATGTGAACCT TAAAGCAAGC 
TGGATTTGCT CACGTAACGA TATGTTGGCC AATATAGGGA TAATAATCTC AGCCGTTTTA 
GTCGGTCAAT TCGATGCAGC ATGGCCTGAT TGGGTAATAG GCAGTGTCAT TGCTGGTATC 
GTCATTCATT CTAGTCTCGC TATTATTAAT GAAGCGAAAG TATCAATTCA AAGCGATGCA 
GTAGCTGATA AAAACCGTAC TTAA
 
Protein sequence
MSSCCAAEAK NASERKLLWI VLILNFSMFV IEFIAGWLAN SSGLLADSLD MLADAAVYSL 
SLYAVGKSLL YKGRAALANG YLQLSLGLLV LVDVARRIWL GSEPQSELML SIGFMALIVN 
MICFVLLYQF RQGDVNLKAS WICSRNDMLA NIGIIISAVL VGQFDAAWPD WVIGSVIAGI 
VIHSSLAIIN EAKVSIQSDA VADKNRT