Gene CPS_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1944 
Symbol 
ID3519895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2008086 
End bp2009162 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content33% 
IMG OID637284406 
Producthypothetical protein 
Protein accessionYP_268674 
Protein GI71279437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTT TACAGTTAAA AAAAACACCA AATGTTTTTA CTAACAACTT TGTATTATTA 
ACTTTGTTTT TTATTGCACT ATGTCAAATA CCATCAGTAT TCGCTTTTGA GAAAAAGGAA
ATTATTGAGC TATCTGTACT GGGTGATTTT GAAATTAAAT TTTCAACAAT AGAAAAAGAA
ACATTGAAAG TCGGTCAAAA TTTAATTGGA GAAGTAACCT ACAAACCTGG GGAGAACTAT
TCTGTTGTAC TACCGTTTGA TGTTCAAAAA GTTACTTACC ATATAAAAAA TGGCAGTTAT
GTAGAACTCG GTGCAACCAT TGCTACTGTA GAAGGATATG ATGTCCATCA CTTTCTCGAC
GAGTTTGAGT CAGCTAAAAT AATACTGGAA GCGTCAGAAA ATCATTTTCA AACCAATAAA
GCTTATTTTG AGAATAAAAC CATAAAAAGC ACCCAATGGA TTGAAATTAC CAAAAGCTAT
TTCAAAGCTA AATTAAATTT TGAACATTTC CAACATCAAA TGTCTTTTTT ACATATTGAT
AAAAATGAAA AAATCACCCT TATTAGCCCT AAAAATGGCA TAGTGAAAAT ACCTAGCTTT
CAGAATATAA AGTCAGCAGG AGATCTCGCT TTTGATGTTA TAAGTACTAA TTCGGTAAAA
GTAAAGATCA CCACACCTTT GTCCTACTCT GCCAACTTAT CCCATTTTAT TATGTCATCG
ACTTGTGAGC TTGAAATTAA CAGCTTTGAA AGTATTGTCG ATAAGTATCA CCAAACAGTA
TGGGCTTCCC CGAAGTCTGA ACAGTGTAAA TTAACATTGG GTCAATCGGT AAAGCTGACC
CCCATACTCA ATTTTGTTGG TTATAAAGTC CCTAAAAAAT CACTTTTTGA GCTCAATGAC
AAAGACTATA TTGCCATAAA ATCTAAAGAT AAAATCTCAC TTACTTCTAT CGTTATTGTT
GGATCAAACA ATAACGAGTA TTACGTTACC GCTAAAGAGG ATATCAGTAA TAAGAAAGCA
CTTGTTAGTT CCGTAAGTAT CCTTCAGGGA AAATTACTTG AGTTAGGGGC TGAATAA
 
Protein sequence
MPFLQLKKTP NVFTNNFVLL TLFFIALCQI PSVFAFEKKE IIELSVLGDF EIKFSTIEKE 
TLKVGQNLIG EVTYKPGENY SVVLPFDVQK VTYHIKNGSY VELGATIATV EGYDVHHFLD
EFESAKIILE ASENHFQTNK AYFENKTIKS TQWIEITKSY FKAKLNFEHF QHQMSFLHID
KNEKITLISP KNGIVKIPSF QNIKSAGDLA FDVISTNSVK VKITTPLSYS ANLSHFIMSS
TCELEINSFE SIVDKYHQTV WASPKSEQCK LTLGQSVKLT PILNFVGYKV PKKSLFELND
KDYIAIKSKD KISLTSIVIV GSNNNEYYVT AKEDISNKKA LVSSVSILQG KLLELGAE