| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1923 |
|---|
| Symbol | |
|---|
| ID | 3519129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1980576 |
|---|
| End bp | 1981625 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637284385 |
|---|
| Product | pyridine nucleotide-disulfide oxidoreductase |
|---|
| Protein accession | YP_268653 |
|---|
| Protein GI | 71278249 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC TAACTACAGA TGTTGCTATT ATCGGTGCAG GTCCCGTTGG TTTATTTCAG
ATATTCGAGC TTGGCTTACA AGGATTAAGT ACTGTTGTAA TTGATAGTTT GCCGGAGATA
GGGGGTCAAT GCAGTGAGCT ATACCCAGAT AAACCTATCT ACGATATTCC TGCCTTGCCT
AACGCAAAAG CAAGTGAAGT GATAGATAAC CTTTGGCAAC AGGCTGCAAT TTTTGACCCT
ACATTTTTAT TGGCTGAACG GGTAGAGCAT ATCGAGAAAG TCTCAGAGCA TTCTTTCATC
GTCACGACTC ATAAACAGAC ACAAATTCAT TGCCGCGCAG TCGTTATTGC GGCGGGTAAT
GGCGCTTTTT CACCTGTTAA ATTAAAACTG CCGTTAATCG ATAAATTTGA AGATACACAA
CTGTTTTACC GTATTAGTAA TATTGAACAT TTCAGAGATA AGAATGTGGT TGTGCTAGGC
GGTGGTGATT CTGCTTTGGA TTGGAGCTTA ACGCTGCAAA AAACAGCTAA GAGTGTGCTT
CTTATTCATC GAAGTAGTAA TTTTAAAGCA GCAAAAAGCA GCGTTAATAA AATGTATGAG
TTATGTGAGC AACTAAAAAT GCAGTTTTTA TGTGGCCAAG TGAGCAGTTT TCAAGAAAAA
GAAAATAAGC TAACAGGACT GACTATTACC TCAAAAGATG GCGTTAACCG CAGAGTGGAA
CTTGATGAAC TCGTCGTTCT TTTTGGGATG TCACCCAAAC TTGGACCAAT AGATAATTGG
CAACTTGAAA TGCATCAACA CCAAATAAAA GTAGATACGC AATCATTTCA AACATCAGTA
ACTGGCATTT ATGCCGTGGG CGATATTAAT TATTACCCCG GTAAAAGAAA ACTTATTCTA
AGCGGCTTTC ATGAGGCAGC GTTAGCAGCC TTTTCTATTG CCGAAACCGT TTTAGAGAAA
GACCGTATTC CCACGTTATA CACAACGACG AGTCCGGTAG TACATCAACG ATTGGGAGTA
GAACACTCAC TGGAAGCGAT GTTGAGTTAG
|
|---|
| Protein sequence | MKTLTTDVAI IGAGPVGLFQ IFELGLQGLS TVVIDSLPEI GGQCSELYPD KPIYDIPALP
NAKASEVIDN LWQQAAIFDP TFLLAERVEH IEKVSEHSFI VTTHKQTQIH CRAVVIAAGN
GAFSPVKLKL PLIDKFEDTQ LFYRISNIEH FRDKNVVVLG GGDSALDWSL TLQKTAKSVL
LIHRSSNFKA AKSSVNKMYE LCEQLKMQFL CGQVSSFQEK ENKLTGLTIT SKDGVNRRVE
LDELVVLFGM SPKLGPIDNW QLEMHQHQIK VDTQSFQTSV TGIYAVGDIN YYPGKRKLIL
SGFHEAALAA FSIAETVLEK DRIPTLYTTT SPVVHQRLGV EHSLEAMLS
|
|---|
| |