Gene CPS_1912 details

Gene Information

• Locus tag: CPS_1912
• ID: 3522684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1971073
• End bp: 1971762
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 637284374
• Product: putative lipoprotein
• Protein accession: YP_268642
• Protein GI: 71282211

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.54686
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTT TAAGTATTGC ATTAATATGT TTCTTTCTAT TATCTTGTTC TTCTACAAAA 
GTTCATCTTT ACTCTCGTTA TTTGTCTGAA CAACAAACAG ATAAAATAAC TAAAACCCTT 
GAAGAACATG ACTTTGAAGT TATAGCTAAC ACATTAGCTT TTCCTGATGA TGTTCAACAA 
TCGACATTAC TTTATTCTCC GTTTGTAAAA GGGGAAGATA ATTTAAATAT ACTAATCGAT 
TCGCTAGAAA ATTTAGGTTG GAGACTCCCA ATAGTAAAAC CTCTCTTTGC GGGTAATCAT 
TACTATACAA AAAATAGTGT TGGCTTGCTT CTTCTTCCTG ATGGACTAAA GCAAAGTGAC 
AAATTACTAT CTCAAGATCT TGTAAATGAT TATGAAGCAG AAAAATGCGA AATATCAGTT 
AAGCTTCGTT TAAATAGAGA TGAGACATAC CAATTGTCAT ATTCAGATGT TCCTTTCAGT 
CAACCAGAGC ACTTAACAGG GAAATGGCAT ATACCAAGTT ATCCGTATAT TAAATTAGTA 
TCTGCAAATA AAATGTGGTC ATTTTATTTT GAAATACAAA AAAAAACAGA CATAGATTTA 
GTAAGTAAAG TAGAGATAAT AGAATTAAAA CCAGTAGATA AACATCATGT ATTTCCTTAT 
TGTAGTTTTA CTTATGGGGT TAGAATTTGA 

 

Protein sequence

MKILSIALIC FFLLSCSSTK VHLYSRYLSE QQTDKITKTL EEHDFEVIAN TLAFPDDVQQ 
STLLYSPFVK GEDNLNILID SLENLGWRLP IVKPLFAGNH YYTKNSVGLL LLPDGLKQSD 
KLLSQDLVND YEAEKCEISV KLRLNRDETY QLSYSDVPFS QPEHLTGKWH IPSYPYIKLV 
SANKMWSFYF EIQKKTDIDL VSKVEIIELK PVDKHHVFPY CSFTYGVRI