| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1909 |
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| Symbol | |
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| ID | 3521396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1968680 |
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| End bp | 1969900 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284371 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_268639 |
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| Protein GI | 71280927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA AAGAAGACCA TCCTGCAATA GTTGTTGGCA TTATGGCAAC GCTTGCAGGG
ATTGGCATAG CCCGCTTTGC TTACACCCCT TTATTGCCCG AGTTAGTACA ACAAGGCTGG
TTCAGTGGAG GTCAAGCTGC TTATTTGGGG GCTGCAAATT TGTTAGGTTA TTTGATTGGT
GCTCTCTCTG CTTTTCGACT ATCAGAATCG TTTGATCCTT CATCAGTGAT AAGGCTTTGT
TTAGTTAGCA TCTGTTTGAG TTTCATTTTT TGTGCTCAGC CAAATAGTTT CGAATGGTTT
TTTATTTGGC GATTTATAGC TGGGATAGCT GGCGCTATTC TTATGGTTGT TGGCCCAGCA
GAAGCTCTGG CTTGTACACC TCTTTCTCGC CGTACAAGTG TAGGTACCTT AGTTTTTATT
GGCATTGGAT TAGGCGCTGT AATATCAGCG ATAACTGTGC CTTTGCTCTT ACAGATTAAT
TTATTTATTA CATGGATTTC TCTTGGAGGT ATCATAATTT TTATTGGCAT ACTCTGTCAT
TTTGCCCTTA AAAAGCTGCC TAATAAAGCA TTTCAAAAAG AGGTAACTTC TGAACAAACC
ACCGATAACC ATAAAACTAA AACTATCGTA TTTTTGCTGG TAGCTGCTTA CGCGCTTGAT
GCCGTAGGCT TTATCCCACA CACAGTATTT TGGGCTGACT ATCTAGCACG AGAGTTAGGA
TTAGGAATTA ATATTGCGTC TACACAATGG TTAGTTTTTG GCATAGGCGC AATGTTAGGC
CCCATTTTTG TTGGCATTAC TGCGCATAAA GTCGGACTAA GCTATGCACT TCTCATTGCT
TTTTTGTTTA AAGCAGTTGC CGTATTCCTT CCCACTTTAT CAGATAGTTT AATTATCTTA
ACAATATCCT CTTTTATTGT TGGCGCTTTG GTTCCAGGAG TTGTTGCACT TGCCTCAGGT
CGAATAGCCG AATTAGTTGG AGCGCGAAAA CACAAACAAT TTTGGGGATT AGCTACGGCT
ACTTTCGCTA TAGCGCAAGC GATTTCAGGC TATGGAATGT CTTTAATTTA TAACCTTTGG
GAAAGTTATA TTTATCTATT TTACATAGGC AGCACAGCGA TAGTTTGTGG TTTTTTTCTT
CTCTTTATAG GAGAAATAGT CATCGCAACA AACAAATCAA AACAAAATAA ATCCACAACA
CTTAATGAGA TGAAACTATG A
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| Protein sequence | MIKKEDHPAI VVGIMATLAG IGIARFAYTP LLPELVQQGW FSGGQAAYLG AANLLGYLIG
ALSAFRLSES FDPSSVIRLC LVSICLSFIF CAQPNSFEWF FIWRFIAGIA GAILMVVGPA
EALACTPLSR RTSVGTLVFI GIGLGAVISA ITVPLLLQIN LFITWISLGG IIIFIGILCH
FALKKLPNKA FQKEVTSEQT TDNHKTKTIV FLLVAAYALD AVGFIPHTVF WADYLARELG
LGINIASTQW LVFGIGAMLG PIFVGITAHK VGLSYALLIA FLFKAVAVFL PTLSDSLIIL
TISSFIVGAL VPGVVALASG RIAELVGARK HKQFWGLATA TFAIAQAISG YGMSLIYNLW
ESYIYLFYIG STAIVCGFFL LFIGEIVIAT NKSKQNKSTT LNEMKL
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