| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1908 |
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| Symbol | |
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| ID | 3520089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1967602 |
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| End bp | 1968480 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284370 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_268638 |
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| Protein GI | 71279630 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.605315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAA AATCACTTCG CCTTTTCATG GATGTAGCAG AGACTGGAAG TTTTGTTGCC
GCAGCAGAGC GTCAACACAC TGTTCAATCG AACGTAACAG CCCATATCAA GAAGCTAGAG
GAAGAGTTAG GTGCTCTACT ATTTCACCGT AAAGGTGGTG CTCGTTTGAC TACAGCAGGT
AGAGATGTGG TCACTTATGC AAAACAAATA CTCAAATCTC ATGATGATGT TTTAGGGTTA
TTTAAAGGTG ATGAGTCTAT ACCTAGTCGA CTGCGAATTG GCGCAATGGA GACAACAACA
GCATTACGTC TACCCCCTGT ATTAGCTGCC TTTCATGCCC GTTATGCTCA AATAGATATT
ACCGTTGAAA CAGCTCCAAC AGCCCAACTG CTAACTCAGT TAATAGAAGG TGATGTAGAT
GGTGTTTTTA TTGCTGGAAA ACCAAAGCAC AAGCGCTTGC AAGTTATAAA AGCATTCTCT
GAAGAATTGG TACTTGTCGG CCCTAAAACA TTACAAAAAT TCCCCACCGC TGAACAATTC
TTAGAAACAA CTTTTCTCGC GTTTCGTCAG GGGTGTAGCT ACCGCCAACG TATTGAGCAA
TTACTTTCAA CTTGTGGAGT CAATGCAACG CGTATTTTTG AATTCGGTAG CATAGATGGC
ATATTAGGTT GTGTGGCATC AGGTATGGGT TATTCAATTA TGCCCTTGTC CACAGTGGAG
GCTCATCGCC ATCGGTTCGA CATTGGTTAT CTCAATCTGC CCTCGTCTAT CGCTAATATA
GATACCTATT TTGTTACAGC TAAGCAGTCA ACTTGGACAC CTTCCCTTAC CCGTTTTGTA
GATATTTTGA AAACAATTAA GTCTGATGTT AAGCAATGA
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| Protein sequence | MQIKSLRLFM DVAETGSFVA AAERQHTVQS NVTAHIKKLE EELGALLFHR KGGARLTTAG
RDVVTYAKQI LKSHDDVLGL FKGDESIPSR LRIGAMETTT ALRLPPVLAA FHARYAQIDI
TVETAPTAQL LTQLIEGDVD GVFIAGKPKH KRLQVIKAFS EELVLVGPKT LQKFPTAEQF
LETTFLAFRQ GCSYRQRIEQ LLSTCGVNAT RIFEFGSIDG ILGCVASGMG YSIMPLSTVE
AHRHRFDIGY LNLPSSIANI DTYFVTAKQS TWTPSLTRFV DILKTIKSDV KQ
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