| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1901 |
|---|
| Symbol | |
|---|
| ID | 3520866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1958555 |
|---|
| End bp | 1959853 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637284363 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_268631 |
|---|
| Protein GI | 71280400 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.380336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA TCTCGTTAAA AAGCTTATTA TTGGCCTGTG CTGCGACAGC ACTTGTTGGT
TGTGGTGGCA GTGAAACTAC TATTACCGAA ATAGAAAAAA CGCCAACACC TATCGATAAT
GACCATGACA ATCACGAAGA GGAGTTAGGT AAAGGTCGCT TAGCTATTGC GGATAGTGAA
CAAGCTGTAG TACATATTTT TGATCTTGAA AATAATGCCT TAGTTGAATC TATTTCGATT
ACCAACCCAG CTGAATATTT ATACGCAAGC CCTGAAAACC GTTATGCGGT AGCAGTGCAG
CGCTCGTTTG ATACGGTTGA ATTTATTGAT GGCGGCTTAT GGCAAGAAGC ACATGGTGAT
CACTTTGATC AACATGCCGA TGCACCTGAG CTTACAAGCT TTACGTTAAA TAGTGTAAAA
CCAACTCACT TTGTCCCACG TGGTGAACAA GTAGCAATAT TTTTTGATGG CAACAAAGAT
ACAGGTGCTA ATGCATCATT AAGTTTGTTA AGTGACGAGA GTATTGCGGC AGAAAAAACG
ATTGCAGAGC ATCACTTTGA AACTTATATG CATGGAACTG CTGAGATCCG CGGTGAATTT
GTATTAGCTA CTCATCGAGA AATTGATGCG GAAGGTAGTT TGCCTGATCA GGTAGCACTG
CTTGAAGTAC ATGATGACCA CTTTCACCAA GAACAACTAT TTGATGTTAA ATGCCCTGAC
TTACATGGTA GCTTTCAAAC AGATACCCAT ATTGCTTTTG CCTGTAGTGA TGGAATTTTA
GCTATAGAGC AGCAAGGTAG TGTATTTACG GCACAAAAGA TTGTTAACCC TGCAGACATG
TCAGAAGGTC TTCGCATAGG TTCACTAAAG GGCAGTTCAG AAAATAATGT GATGATTGGT
AATGCACGTG GTAGTTTCTT TTTAGTTGAT TTAATAACGC AGCAAATCAG CCCGTTTAAT
TGGCAAAAAG AAGAAGCACT TACTTCCGTA ACCTATGGCT TTGATGGTCA TAACGAGCAT
ATGCTTATTC TCGATAATAC GGGACAATTA AACGTATTTT CAGCAGAAAA TAATTGGCAA
TTAGATAGTC GTATTAAAGT ATTTAGTGCC CTAGCGGAAG ATTCAAAACC ACTCATTATT
TCTTCAAAAG CCCACGAGAT TATTTATATC GTTCATGAGC AAGAAGTTAC TGAAATTGAT
TTACATGAAG GTGTCGTAGT TGGGCACTTT GATTTAACAT TCACACCTGG TAAAGCAGCG
TGGTTAGGTG TTGCTGGTGA AGAGGAGCAC GATCACTAA
|
|---|
| Protein sequence | MKIISLKSLL LACAATALVG CGGSETTITE IEKTPTPIDN DHDNHEEELG KGRLAIADSE
QAVVHIFDLE NNALVESISI TNPAEYLYAS PENRYAVAVQ RSFDTVEFID GGLWQEAHGD
HFDQHADAPE LTSFTLNSVK PTHFVPRGEQ VAIFFDGNKD TGANASLSLL SDESIAAEKT
IAEHHFETYM HGTAEIRGEF VLATHREIDA EGSLPDQVAL LEVHDDHFHQ EQLFDVKCPD
LHGSFQTDTH IAFACSDGIL AIEQQGSVFT AQKIVNPADM SEGLRIGSLK GSSENNVMIG
NARGSFFLVD LITQQISPFN WQKEEALTSV TYGFDGHNEH MLILDNTGQL NVFSAENNWQ
LDSRIKVFSA LAEDSKPLII SSKAHEIIYI VHEQEVTEID LHEGVVVGHF DLTFTPGKAA
WLGVAGEEEH DH
|
|---|
| |