Gene CPS_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1893 
Symbol 
ID3521300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1953850 
End bp1954605 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content39% 
IMG OID637284355 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_268623 
Protein GI71280831 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.128546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGTA GTGATACGAA ATGTGCCATG AGTATCGTCA CAAAGGGTCT CAGTTTTTAT 
TACGGTAAAA AGCCTGCAGT CGATGGTTTA GACCTCAGTA TTACCAGTGG TTTTAATGTA
TTACTTGGTC CCAATGGCGC AGGTAAAAGT ACTTTGTTCT CCATGTTAAC GGGCCTTTAT
CAGGCGGCAT CAGGGGATAT TAAAATCAAT GGTTATGACT ATAAACATCA TAAGTTGAAC
ATTATGCAAT CAATGGGCGT GGTTTTTCAG CAAAGTACGT TAGATTTAGA TTTATCGGTT
AAGCAGAACT TAACCTATTA TGCTGCGCTA CATGGCATTT CATCAGCACA AGCGCTCGAC
AATATCAGTG AGATTTTGTC CCAACTGCAA TTAACAAAGC GACTCGATGA TAAAGTCAGA
TCATTGAATG GCGGACATCG CCGTCGTGTT GAAATTGCTC GAGCATTAAT TCATCAACCC
AAAGTATTAT TGCTTGATGA GGCAACGGTT GGTTTAGATA TTGATAGCAG AAAAATGATC
ACAGAGTACG TTGGTTCGCT TAGTCAAAAA TTAGGTATTT GTGTGTTGTG GGCAACGCAT
TTAATCGATG AAATATCAGC AGGTGATCAA TTAATTATTA TTGATGAAGG AAAAATTAAA
GCACAGGGTA TTAGTGGAGA ATTATGTAAA AAGCATAATG TCACCGATGT ATACCAGCTT
TATCGCTCGT TAACGGCTAA CGCGGAGCTC ACTTGA
 
Protein sequence
MGRSDTKCAM SIVTKGLSFY YGKKPAVDGL DLSITSGFNV LLGPNGAGKS TLFSMLTGLY 
QAASGDIKIN GYDYKHHKLN IMQSMGVVFQ QSTLDLDLSV KQNLTYYAAL HGISSAQALD
NISEILSQLQ LTKRLDDKVR SLNGGHRRRV EIARALIHQP KVLLLDEATV GLDIDSRKMI
TEYVGSLSQK LGICVLWATH LIDEISAGDQ LIIIDEGKIK AQGISGELCK KHNVTDVYQL
YRSLTANAEL T