Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1893 |
Symbol | |
ID | 3521300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1953850 |
End bp | 1954605 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284355 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_268623 |
Protein GI | 71280831 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.128546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGTA GTGATACGAA ATGTGCCATG AGTATCGTCA CAAAGGGTCT CAGTTTTTAT TACGGTAAAA AGCCTGCAGT CGATGGTTTA GACCTCAGTA TTACCAGTGG TTTTAATGTA TTACTTGGTC CCAATGGCGC AGGTAAAAGT ACTTTGTTCT CCATGTTAAC GGGCCTTTAT CAGGCGGCAT CAGGGGATAT TAAAATCAAT GGTTATGACT ATAAACATCA TAAGTTGAAC ATTATGCAAT CAATGGGCGT GGTTTTTCAG CAAAGTACGT TAGATTTAGA TTTATCGGTT AAGCAGAACT TAACCTATTA TGCTGCGCTA CATGGCATTT CATCAGCACA AGCGCTCGAC AATATCAGTG AGATTTTGTC CCAACTGCAA TTAACAAAGC GACTCGATGA TAAAGTCAGA TCATTGAATG GCGGACATCG CCGTCGTGTT GAAATTGCTC GAGCATTAAT TCATCAACCC AAAGTATTAT TGCTTGATGA GGCAACGGTT GGTTTAGATA TTGATAGCAG AAAAATGATC ACAGAGTACG TTGGTTCGCT TAGTCAAAAA TTAGGTATTT GTGTGTTGTG GGCAACGCAT TTAATCGATG AAATATCAGC AGGTGATCAA TTAATTATTA TTGATGAAGG AAAAATTAAA GCACAGGGTA TTAGTGGAGA ATTATGTAAA AAGCATAATG TCACCGATGT ATACCAGCTT TATCGCTCGT TAACGGCTAA CGCGGAGCTC ACTTGA
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Protein sequence | MGRSDTKCAM SIVTKGLSFY YGKKPAVDGL DLSITSGFNV LLGPNGAGKS TLFSMLTGLY QAASGDIKIN GYDYKHHKLN IMQSMGVVFQ QSTLDLDLSV KQNLTYYAAL HGISSAQALD NISEILSQLQ LTKRLDDKVR SLNGGHRRRV EIARALIHQP KVLLLDEATV GLDIDSRKMI TEYVGSLSQK LGICVLWATH LIDEISAGDQ LIIIDEGKIK AQGISGELCK KHNVTDVYQL YRSLTANAEL T
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