| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1882 |
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| Symbol | |
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| ID | 3521640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1939704 |
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| End bp | 1942268 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284344 |
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| Product | sensory box sensor histidine kinase/response regulator |
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| Protein accession | YP_268612 |
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| Protein GI | 71281169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC AATCCCTAGA AGAAGAGTTA GCTGAATTAA AAAAGCAAAA TACCAAGTTA
AAGAAAATCA ACGACGCTTT GATGCAACGG GTAGAAGACA GCGGAGAAAA TCAGTATGCG
CCTTATACTG CCTTTGAACA TTCGGTGCAC CTGGCTGAAC AAGTAAGAGA AAAAACGCAA
ACCTTAAATG AAACACTGGC AAAACTTGAG CGAAGTAATC ACGCATTAAA ACAAGCAAAT
GCTCAAGCTA ATCTGTTCAA ACAACGTTTC ATTGATGCAA TAGAAAGTAT TTCAGAAGCC
TTTGTTTTAC TCGACAGTAA AGGTCGAATT ATTCTACAAA ACAGTAACTT CGCCAATTTT
TGGCTCGACT CAGGTTTACC CATTACAGAA GGCGTCAATC TCAAAGATTT AAAAGATTTA
GCGAAAACCC GCGGTATTAT TCAACGAGCT TCTCCAGGTG ATGCGTTTGC CAGCCCGGTA
TATCAATTAT CAGATGGTCG ATGGTTTCAA TTAAACGAAC ACCAAACCAG CGAAGGTGGT
TGGGTAATGC TCTATACCGA CATTACCGCA GTGAAAACGG CCGAAAGTGC CCGTTATGAA
AGAGGCATGG CGCAAAAGTC GCTGTTACTA CAAAACTTGA TTGATAACAT TTCTCAAGGT
GTTGTGTTGA TCAGCAGTCA TAACAAAATC GAAGTATGGA ATACGCGTTT TGCCCAGATC
AGTCAATTAT CCCCTCACCT GTTACGAGGA ACGCCCACCA CTGATAATAT GCAACATTTA
ACGGAACTCG ATTTAGCACA AAAATCAAGT ACCAATAACT ATTCTTACAC CCAAACATTG
ATTAACGGAA CCGTATTAGA AATAAAAAGT CACCGACTTA AAAACGGAAA AACCATTAAG
ACCTATAGCG ATATTACCGA ACGTCATCGT TACGCGGAAT CCTTAAGAAA AAGTGAAAGT
TGGTTACGAT TAATCACGGA TAACGTACCC GCTATGATTG CTTATGTCGG TAAGGATCTA
AAGTATCAGT TTACCAATCA AGTGTACGTT GACTGGTATG GTTGGCCACA GGGTGGCCTT
AATGGCTTAG AGTTAGAACA AAGTCGTGTC CATTCAAACT TTACTAAAAT AAGACGTTAC
GTTGATCGCG CTTTGGAAGG TGAAAGTGTT AGTTTTACCA TTGATGAAAA AAATAAATTT
GGTGAATCGA GCTATTTATT AAAATCTTAT GTGCCTAATC GTGATGTTAA CGGCGATGTC
CTTGGATTTT TCGTACTCAT TCGTGATATC ACCGAACGAA GAAAGAATGC CTTAGCCCTA
CAAAAAGCTC ATGACCAACT GGAAGTTAGG GTACAAGAGC GAACCTCTCA ATTACAAAAT
TTAAATGACA AGCTGCAAGT GGAAGTAGAA GATCGACGCC AGGCGCAATC CAATCTTGTC
AAAGCCAAAA GCGAAGCAGA GTTTGCCAAC GTTTCAAAAA CAAAATTTCT TGCCGCTGTG
AGTCATGATT TATTACAACC GTTAAATGCT GCGCAATTGT TTACCAGTTC ATTAATGGAG
CGTCCTTTAG AAGATAAGAC TAAAAATCAG CTTAACTCAG TCGCTAATTC ATTAGACGAT
CTAGAGAATT TAATCTCAAC ATTGGTTGAT ATTTCAAAAC TTGATGCTGG TGTGGTTAAA
GCTGATAAAA GCTCATTTAA ATTGTCAGAG TTACTCAACA ATCTTGTGAG TGAGTACCAA
CAAATCAGTG GTCAATTTCA GGTAGAATTG CACTATGTCA GCAGCGATGT TGTCGTAAAC
AGCGACAGTG TTTTACTTGC CCGTATACTG CGTAATTTCC TATCAAACGC CTTTAGATAT
ACCAACAACG GTAAAGTATT ATTGGGCTGT AGACGTCAAG GTAACCATGT ATCTATCGAA
GTATGGGACA ATGGTACTGG CATTGCTCAA GACCAAATTA AAGAAATATT TAAAGAGTTC
AAACGTCTTA AAGCTTCTCA AACGGCGTTT CGTAATGGCC TTGGTTTAGG GTTAGCCATA
GTCGATAAAA TTTCTAAAGT ACTCGAACAT CCCATTAATG TTAACTCTGC CTTAGGTAAA
GGTTCGGTGT TTTCAGTAAA AGTACCGCTT GGAAAGATAA GTGATTTACC TCAATCAAGT
GACCCGCTTA ATTATATTAT GGATACTCCA GTGTTAGCGA AAAGTAAAAT CTGGCTTATT
GATAATGATG CAAGTGTTTG TGCTGGTATG TCACAACTTT TAGAGGGTTG GGAGTGTGTG
GTAATAACTG CCACTAGCCT TGAGGACTTG CAACAACAAG TGGATATCAG TCATGATCAT
GCTGATATAT TAATCGTCGA TTATCACCTG GATGACGGCG TAAATGGCTT CGATGTAGCA
AAAGAAATTA ACCAAAGTCG AGATAAACCA TTACCCGTGA TGATGATCAC CGCTAATTAC
AGTAAACAGC TGAAAAAAGA AGTCAAAGAT AGTGAAATTT TATTATTAAA TAAACCCGTT
AAACCGATGA AATTAAAAAC TTCAATGCTG TATTTATTGA AATAA
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| Protein sequence | MSDQSLEEEL AELKKQNTKL KKINDALMQR VEDSGENQYA PYTAFEHSVH LAEQVREKTQ
TLNETLAKLE RSNHALKQAN AQANLFKQRF IDAIESISEA FVLLDSKGRI ILQNSNFANF
WLDSGLPITE GVNLKDLKDL AKTRGIIQRA SPGDAFASPV YQLSDGRWFQ LNEHQTSEGG
WVMLYTDITA VKTAESARYE RGMAQKSLLL QNLIDNISQG VVLISSHNKI EVWNTRFAQI
SQLSPHLLRG TPTTDNMQHL TELDLAQKSS TNNYSYTQTL INGTVLEIKS HRLKNGKTIK
TYSDITERHR YAESLRKSES WLRLITDNVP AMIAYVGKDL KYQFTNQVYV DWYGWPQGGL
NGLELEQSRV HSNFTKIRRY VDRALEGESV SFTIDEKNKF GESSYLLKSY VPNRDVNGDV
LGFFVLIRDI TERRKNALAL QKAHDQLEVR VQERTSQLQN LNDKLQVEVE DRRQAQSNLV
KAKSEAEFAN VSKTKFLAAV SHDLLQPLNA AQLFTSSLME RPLEDKTKNQ LNSVANSLDD
LENLISTLVD ISKLDAGVVK ADKSSFKLSE LLNNLVSEYQ QISGQFQVEL HYVSSDVVVN
SDSVLLARIL RNFLSNAFRY TNNGKVLLGC RRQGNHVSIE VWDNGTGIAQ DQIKEIFKEF
KRLKASQTAF RNGLGLGLAI VDKISKVLEH PINVNSALGK GSVFSVKVPL GKISDLPQSS
DPLNYIMDTP VLAKSKIWLI DNDASVCAGM SQLLEGWECV VITATSLEDL QQQVDISHDH
ADILIVDYHL DDGVNGFDVA KEINQSRDKP LPVMMITANY SKQLKKEVKD SEILLLNKPV
KPMKLKTSML YLLK
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