Gene CPS_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1880 
Symbol 
ID3519880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1937173 
End bp1938972 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content40% 
IMG OID637284342 
Productcysteine ABC transporter, ATP-binding/permease protein 
Protein accessionYP_268610 
Protein GI71279422 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 
TIGRFAM ID[TIGR02868] thiol reductant ABC exporter, CydC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCT TTATACGCTT AATTTGCTTA CTTAAACCGC AGTTGCCGTT AATGTTACTT 
GGCGCATTAT TGTCAGTCAT TACCGTGTTA GCCAATATTA GTTTACTGGC AGTGTCAGGC
TGGTTTATTA CCTTGATGGC CATTGCCGGA ACAACAGGTA TCACGGTCAA TTACTTTACC
CCTGCGGCAA TTATTCGTTT TTTAGCCATA GTGCGCACCG CGGGTCGCTA CGCAGAACGG
ATGTTAACGC ATCGAGCAAC GTTTAATGCA CTGGCACATT TACGCCATTA CTTCTATCAA
CAGCTAGAGC CGCTACTACC TTATTACCGG ATTAATTTAC GCTCGGGTGA TTTGTTAGCA
AGGTTGCAGC AAGATATAGA TAATCTTGAT AATTTCTATT TACGGGTACT GCTACCTATT
GTGGTTGCCC TAATATCAGT CCCTATTGTT TGTTATGCAC TTGCTATTTT CTCACCCACT
ATTGCTTGGG TCATGCTAGC GGCATTTTTG ATTGTCGGAC TTGTTTTCCC GGTGATCAGT
TATTTAGCGT CAACAATACT CTCGCAAGAA AAATCTCACC TAGAAAGTCA TCTCACTGAA
GAGTTAGTTA ATGGTATTGG CGCGATTAAA ACGCTATTGG TGTACCAAGT AAGCATCAGT
TATCAGCGCT CAATAGCAAA CATTACCAAA CAATATTATG GTGTGCGTTA TCGCTTAGTT
AAAATTAATG CCAGATTGAC AGCGATAATT TTTCTACTTA TTCATTTATC AGCGTTAGCG
TGCTTATTAC TGTTATTACC ACAGTTATCA ACGGGCGAAG TTGACAGTAA GTCTTTAGTC
GCGGTTATTT TATTGGTATT GGTGAGCTTT GAAACCGTGA GTAGCATGCC ATTGGCATTG
CAGTTGTTAC CGCAAAGCCT AGCCAGCGCG GCAAGATTAT TCGCTATTAT CGATAAAGAA
ATACCTGTAG ATATTGGCGT TGAGAGAGTG AAACATGGTG ATATTCATTT TGAGAACTTC
ACTTTTAGTT ATCCAGAGAA AAAAACGCCT AGTTTAATTG ATATAAACTT ATCAATAAAA
GCCGGCGAAA AAGTTGCAAT TATTGGTGCA AGTGGGGCAG GGAAGTCAAC ATTAGTTAAT
TTACTGATGG GCTTTTGGCC GACGGGCCAG GCTCTTTCAT CAATAAATGC TTCTTTTAAT
TCTTTAACGA ACCCCTCATC AAATGCCACC GAAAGTAAAA ATAACAAAGG CAGGATTACT
ATTGCCGATT GTGATTTGAG CTTGATAGAA CATGAGTCTC TGCGCCAACA TATTGCCTTG
ATGAGCCAGC AAGGGCATAT CTTTGAGGCA AGTATTGCGG ATAATTTACG TTTAGCTAAA
CACGATGCTA CGCATGAAGA AATGCGTAAA GTCTGTCAAT TAGTTAACAT AATTGATTTT
ATTGAGGGCT TACCCAAAGG TTTAGATACT TGGTTAGGAA CCAGTGGTGC AGGGTTGTCA
GGTGGTCAAG CTCAGCGATT ACAAATTGCC CAATTACTAC TGCGCTCTGC CAGTGTGCTG
ATTTTAGATG AACCAACAAA AGGGTTAGAC CGTCATAATG AAGAACAGAT TATGCGTAAT
ATATTAGCCC ATGTGAAGCA ACAGCAACAA AGCTTACTGG TGATCACTCA CAAACCTTTG
ATGTTAGAAA AAATGGATAA AATAATCGTC ATGCAGCAAG GAGAAATTGT TGCTCAGGGC
AGCCACAGTC AACTGGTTAA CAATAACGAT TATTATCAAA AACTACTAAA TTATTTTTAA
 
Protein sequence
MKVFIRLICL LKPQLPLMLL GALLSVITVL ANISLLAVSG WFITLMAIAG TTGITVNYFT 
PAAIIRFLAI VRTAGRYAER MLTHRATFNA LAHLRHYFYQ QLEPLLPYYR INLRSGDLLA
RLQQDIDNLD NFYLRVLLPI VVALISVPIV CYALAIFSPT IAWVMLAAFL IVGLVFPVIS
YLASTILSQE KSHLESHLTE ELVNGIGAIK TLLVYQVSIS YQRSIANITK QYYGVRYRLV
KINARLTAII FLLIHLSALA CLLLLLPQLS TGEVDSKSLV AVILLVLVSF ETVSSMPLAL
QLLPQSLASA ARLFAIIDKE IPVDIGVERV KHGDIHFENF TFSYPEKKTP SLIDINLSIK
AGEKVAIIGA SGAGKSTLVN LLMGFWPTGQ ALSSINASFN SLTNPSSNAT ESKNNKGRIT
IADCDLSLIE HESLRQHIAL MSQQGHIFEA SIADNLRLAK HDATHEEMRK VCQLVNIIDF
IEGLPKGLDT WLGTSGAGLS GGQAQRLQIA QLLLRSASVL ILDEPTKGLD RHNEEQIMRN
ILAHVKQQQQ SLLVITHKPL MLEKMDKIIV MQQGEIVAQG SHSQLVNNND YYQKLLNYF