Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1880 |
Symbol | |
ID | 3519880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1937173 |
End bp | 1938972 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284342 |
Product | cysteine ABC transporter, ATP-binding/permease protein |
Protein accession | YP_268610 |
Protein GI | 71279422 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTCT TTATACGCTT AATTTGCTTA CTTAAACCGC AGTTGCCGTT AATGTTACTT GGCGCATTAT TGTCAGTCAT TACCGTGTTA GCCAATATTA GTTTACTGGC AGTGTCAGGC TGGTTTATTA CCTTGATGGC CATTGCCGGA ACAACAGGTA TCACGGTCAA TTACTTTACC CCTGCGGCAA TTATTCGTTT TTTAGCCATA GTGCGCACCG CGGGTCGCTA CGCAGAACGG ATGTTAACGC ATCGAGCAAC GTTTAATGCA CTGGCACATT TACGCCATTA CTTCTATCAA CAGCTAGAGC CGCTACTACC TTATTACCGG ATTAATTTAC GCTCGGGTGA TTTGTTAGCA AGGTTGCAGC AAGATATAGA TAATCTTGAT AATTTCTATT TACGGGTACT GCTACCTATT GTGGTTGCCC TAATATCAGT CCCTATTGTT TGTTATGCAC TTGCTATTTT CTCACCCACT ATTGCTTGGG TCATGCTAGC GGCATTTTTG ATTGTCGGAC TTGTTTTCCC GGTGATCAGT TATTTAGCGT CAACAATACT CTCGCAAGAA AAATCTCACC TAGAAAGTCA TCTCACTGAA GAGTTAGTTA ATGGTATTGG CGCGATTAAA ACGCTATTGG TGTACCAAGT AAGCATCAGT TATCAGCGCT CAATAGCAAA CATTACCAAA CAATATTATG GTGTGCGTTA TCGCTTAGTT AAAATTAATG CCAGATTGAC AGCGATAATT TTTCTACTTA TTCATTTATC AGCGTTAGCG TGCTTATTAC TGTTATTACC ACAGTTATCA ACGGGCGAAG TTGACAGTAA GTCTTTAGTC GCGGTTATTT TATTGGTATT GGTGAGCTTT GAAACCGTGA GTAGCATGCC ATTGGCATTG CAGTTGTTAC CGCAAAGCCT AGCCAGCGCG GCAAGATTAT TCGCTATTAT CGATAAAGAA ATACCTGTAG ATATTGGCGT TGAGAGAGTG AAACATGGTG ATATTCATTT TGAGAACTTC ACTTTTAGTT ATCCAGAGAA AAAAACGCCT AGTTTAATTG ATATAAACTT ATCAATAAAA GCCGGCGAAA AAGTTGCAAT TATTGGTGCA AGTGGGGCAG GGAAGTCAAC ATTAGTTAAT TTACTGATGG GCTTTTGGCC GACGGGCCAG GCTCTTTCAT CAATAAATGC TTCTTTTAAT TCTTTAACGA ACCCCTCATC AAATGCCACC GAAAGTAAAA ATAACAAAGG CAGGATTACT ATTGCCGATT GTGATTTGAG CTTGATAGAA CATGAGTCTC TGCGCCAACA TATTGCCTTG ATGAGCCAGC AAGGGCATAT CTTTGAGGCA AGTATTGCGG ATAATTTACG TTTAGCTAAA CACGATGCTA CGCATGAAGA AATGCGTAAA GTCTGTCAAT TAGTTAACAT AATTGATTTT ATTGAGGGCT TACCCAAAGG TTTAGATACT TGGTTAGGAA CCAGTGGTGC AGGGTTGTCA GGTGGTCAAG CTCAGCGATT ACAAATTGCC CAATTACTAC TGCGCTCTGC CAGTGTGCTG ATTTTAGATG AACCAACAAA AGGGTTAGAC CGTCATAATG AAGAACAGAT TATGCGTAAT ATATTAGCCC ATGTGAAGCA ACAGCAACAA AGCTTACTGG TGATCACTCA CAAACCTTTG ATGTTAGAAA AAATGGATAA AATAATCGTC ATGCAGCAAG GAGAAATTGT TGCTCAGGGC AGCCACAGTC AACTGGTTAA CAATAACGAT TATTATCAAA AACTACTAAA TTATTTTTAA
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Protein sequence | MKVFIRLICL LKPQLPLMLL GALLSVITVL ANISLLAVSG WFITLMAIAG TTGITVNYFT PAAIIRFLAI VRTAGRYAER MLTHRATFNA LAHLRHYFYQ QLEPLLPYYR INLRSGDLLA RLQQDIDNLD NFYLRVLLPI VVALISVPIV CYALAIFSPT IAWVMLAAFL IVGLVFPVIS YLASTILSQE KSHLESHLTE ELVNGIGAIK TLLVYQVSIS YQRSIANITK QYYGVRYRLV KINARLTAII FLLIHLSALA CLLLLLPQLS TGEVDSKSLV AVILLVLVSF ETVSSMPLAL QLLPQSLASA ARLFAIIDKE IPVDIGVERV KHGDIHFENF TFSYPEKKTP SLIDINLSIK AGEKVAIIGA SGAGKSTLVN LLMGFWPTGQ ALSSINASFN SLTNPSSNAT ESKNNKGRIT IADCDLSLIE HESLRQHIAL MSQQGHIFEA SIADNLRLAK HDATHEEMRK VCQLVNIIDF IEGLPKGLDT WLGTSGAGLS GGQAQRLQIA QLLLRSASVL ILDEPTKGLD RHNEEQIMRN ILAHVKQQQQ SLLVITHKPL MLEKMDKIIV MQQGEIVAQG SHSQLVNNND YYQKLLNYF
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