| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1877 |
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| Symbol | cydB |
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| ID | 3519258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1934019 |
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| End bp | 1935173 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284339 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_268607 |
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| Protein GI | 71279251 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.300709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTGATT ACGAAACATT AAAATTTATA TGGTGGTGTC TTATCGGTTT TCTTTTCATC
GGTTTTGCAA TCACCGATGG TATGGATATG GGCGTAGGTG GTTTGTTACC CTTTGTTGCT
AAAAAAGATG TCGAGAGTCG AGTGGTTATC AATACGGTTG GTGCGCACTG GGATGGCAAC
CAAGTTTGGT TTATTACCGC AGGCGCTTCT TTGTTTGCGG CGTGGCCTTT AGTGTATGCA
ACGGCATTTA GCGGTTTTTA TTTTGCCATG ATGTTAACAC TCTTTAGTTT GTTTTTACGT
CCTCTTGCCT TTGATTACCG TAGTAAAATT GACTCATTAA AGTGGCGAAC TAACTGGGAC
AAAGCATTAT TTGTTGGCTC TATGGTGCCA CCCTTAGTGT TCGGTGTTGC CTTTGGTAAT
TTATTACAAG GTGTACCTTT TGGCTTTGAT TCGCTCATGC GGGTAACGTA TACCGGTTCA
TTTTTTGCTT TATTTACCCC TTTTACGTTA TTAACGGGTG TAGTGAGCGT AGCCATGATG
TTGCTGCATG GTTCAACGTG GTTAGTCATG AGAACAGATG CTGATGTTGC TCAGCGTTCA
GCCAATATTG GTCGTGTGGT TGCCGTCGTA TTATCGCTTT CTTTTGCATT GGGAGGGGTG
ATGATTTGGC AAAATATTGA TGGTTACTTG GTTGTTAGTA CTATCGATAC CATGGGACAA
GCACAGCCAA CAATAAAAGA AGTGACAACA GGTTCAGGGG CTTGGCTCAA TAATTATAAA
GAGACTCCAT TGTTATGGCT AGTACCTGCT GTTGGGGTAG TTGCACCACT TTTTGTGGCA
CTTTTGTTGA GCATAAAAAG TAAGAGTACC TCAGTAAAAG TATTTGCTTT TATCGGGAGT
TCTTTAACTA TTATCAGTAT TATTTTAACC GCTGGCGTTG CTATGTTTCC ATTTGTTATG
CCATCGAGCA GTGTTCCAAA TCACAGTTTA TTGATGTGGG ATACTGTCTC TAGTGAAGGA
ACGTTAGGGT TAATGTTCAT GGTCGTTGCC TTTTTTATCC CTATCATTAT CGGTTATACC
CTTTGGTGTT ACAAAAAAAT GTGGCGTACG GTTACCATCG CTGAAATTGA GCAGAATAAT
CACACCGCCT ATTAA
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| Protein sequence | MFDYETLKFI WWCLIGFLFI GFAITDGMDM GVGGLLPFVA KKDVESRVVI NTVGAHWDGN
QVWFITAGAS LFAAWPLVYA TAFSGFYFAM MLTLFSLFLR PLAFDYRSKI DSLKWRTNWD
KALFVGSMVP PLVFGVAFGN LLQGVPFGFD SLMRVTYTGS FFALFTPFTL LTGVVSVAMM
LLHGSTWLVM RTDADVAQRS ANIGRVVAVV LSLSFALGGV MIWQNIDGYL VVSTIDTMGQ
AQPTIKEVTT GSGAWLNNYK ETPLLWLVPA VGVVAPLFVA LLLSIKSKST SVKVFAFIGS
SLTIISIILT AGVAMFPFVM PSSSVPNHSL LMWDTVSSEG TLGLMFMVVA FFIPIIIGYT
LWCYKKMWRT VTIAEIEQNN HTAY
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