| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1874 |
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| Symbol | |
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| ID | 3521254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1927632 |
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| End bp | 1930667 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637284336 |
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| Product | hypothetical protein |
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| Protein accession | YP_268604 |
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| Protein GI | 71280785 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.794272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTG GGCAAAAGTT TTCTTTATTA AATAAGCGTA TTAAAGCCAT CATTTATAGT
GGCATTGTGG TGTTCCTATA TGCCATAAGT GGCTTTTTTA TCTTACCTCT TATAGTAAAA
CCACTCATCA TTGACACAGT GACAGAAAAA TTAGAACGAC AAGCGCAATT AGACGTTATC
GAATTTAACC CGTTCACTTT ATCAATTACC TTAAAAGGTT TCAGTATTAG CGGTAAGCAT
ACCGATAAAC TACTTGATTT CGATTTGTTA ACGGTAAATT TACAAGCCTT TCCGCTTTTA
CAAAAAACGA TTTCTTTTGA CGAAATAATT ATTAATAAAC CCGAAGTTAG CGTAATCATA
CTTGCTAATG GTGAATTCAA CTTTCAAGAT ATTATCCTTA AAAATACCGC TCTCGATAGT
GAAGTTGACA GTGAAAATAC GAATGAAGCT GCTTGGATTT TATCAATAGA TAAGTTTCGT
CATAATGAAG GGATTATCAA CTTCAGTGAT CAGAATAGAG AAACAGCTTA CCACCATACA
ATTAAAGAAA TTAATGTTGC GTTGGATAAT TTCTCCACTA AAGCGGGTGA CAATAATATG
CACCTTGTTA AAGCTAAAAC ATCACAAGGT ACTGAGCTCA ACTGGCACGG AAAATTTAGT
TTATCTCCGC TTAAGTCTTC AGGTGATATT AGTTTTGTCA GTCCATTAAA GATTGTCTCA
GACTATTTGC AGCAAAGAAT ATTATTCAAT ATTACTGAAG GGTCATTGAA GGTTAATAGT
CATTATGATT TTAACTTTGC AGGTGAACAG CCACAATTTA TTATCAATAA TTTAATGGCT
TCAATTTCAG CATTAGAAAT CCGCAGTAGA GATGACAACA AAAAAATAAT TACCTCGGAT
GAACTAAGTG TAGACCTTGA GCAATTGAGT TCATCGGATA AAAAAATAGT AATTAATAGT
ATTTCTAACA CAGGCAGTTT TATTGCGGTG AACCGGAACA AGTTATCGCA GTTTGATATA
GAAAAATTAT TTATACTACA GCAGCTAAAT CAATCAGTTA GTACTGATGA AACTGAAGTT
TCAACGGAAA GTTCGACTGA AAAAGATGAA GCCGTAAAAC ATAAGGATAA TAAGCGTGAG
AACTGGGATC TAGAAATAAA GGCCATCAGT ACAAGTAATA ATAATATTGT CATTAACGAT
AGTTCAGTAT CACCCATAGC AATTCATGAC GTCACAATAA AGTCATTAAC AATTGAACAT
TTAAAACCTT TTACCGACGA ATTAGCACTA TTATCCTCAA CTATAGGCTT GAACACTCAA
GGTATTATTA ACCTGAAGGG CACAATAAAA CCTGAATCTA AACAGTTGTC CCTAGCCCTT
GATACCGAGC AAATATCGCT AAAAGATTTC CAGCCTTATA TTAACTCTGT TGCTAACATG
AAAATACTTA ATGGTGAGTT AGCGACAAAC TTAATGATAG ATATTGACGC TGCTAAGGTT
ACTCCTTTAT TGAATATTAA GGGTGATATT AAAGTAAGTT CGCTAAATGT CATTGAGACA
ACATTAAATG AAGAGTTTTT AAGTTGGGAA AATTTAACTT TAAACGATAT GCAATTTAGT
TACCCAGCGC AACGTTTGAA CTTGTCTGCG ATTAATATTA ATGAACCTTT TCTACGTCTA
GTTATTAATG AAGGTAGTAC TACCAATATT CAACAATTGA TGAAAGTGGA ACAAGCAGAT
GCGTCAGATT CAGAGACGAA AAACAGTAAG TCTGAGGTTA ACAATGAAGT CAGCTCAGCA
GAGCAAAGTT TTACAGCAGA TATTAATGAA ATCAATATAA CTAATGGGAA ATTGGATTTC
TCAGATAGCT CACTAACTCC TAAATTCAGT GCTGGAATTT ATAGTCTAAA TGGCGATATC
ACAGGATTAT CTTCCAATGA AGACAGCAGA GCAAAAATAG ATTTAAAAGG TAAAGTCGAT
AAATATGCGC CTGTTATTAT CAAAGGTTCC GTGAACCCGC TAAGTCATGA TGCCTTCACT
GATATTGACA TGTTATTTAA TGGAATCGAG TTAACGACAT TTACACCTTA TAGTGGGAAA
TTTGCTGGCT ATGCAATAGA TAAAGGCAAA CTGAGTTTAG GGTTAAATTA TAAATTGTCT
AATAATAAGC TGGTTGCTGA AAATAATGTA ACGTTAGATC AGCTCACTTT AGGTGAGGTT
GTTAACAGCG AAGAAGCCAC CAGCTTACCG ATAAAATTTG CATTATCTCT GCTAAAAGAT
AGCGATGGGG TAATAGAATT TAACTTGCCT ATTCGAGGTG ACATCGATAA CCCAGATTTT
AAATATTCAA GTTTGGTTTG GGGTGCATTG GGGAATTTGA TTACCGGTAT TATAAGCTCT
CCTTTTAAAG CGTTAGCAAG CTTGGTTGAG GGAGATAATG ACAATTTAGA TCATGTAATT
TTTACCGCAA ATAGTTTTGA ACTTAATGAG GCGGAGCAGG GCAAACTTAA TTCACTCGCC
AAAGCATTAT TACAGCGACC TTCTTTATAC ATAGAAATAA GAGGATTAAG TTCAAACTTA
ATTGATCATG ACGAAATGGC GTATGCAAAA ATATTAAAAC AATTGCAAAT TGCGCCTAAA
ACCTTATCGG GCGTGCTCAG CGAAGATGAG AAAACATCGT TAGTTACTTA TTACCATTCG
TTGAATAAAC AAACAGCGCA AGAAAATCCG AAAGAAGAAC CTTCAAATCA AGTAGACGTT
GCTCCTACGT TAACTAAAGA AGATCAGGAA CTAGCTAAAG AGAAACTCTT TAATGAGGCG
ATTAAGTTTA TGCTTGCTGA AACACCGATA ACAGACGCAG AATATTTAAT GCTGGCAAAA
CAACGCGCAT TACAAATTCA AAAGCACCTG ATTGAAACGG CTCAAGTGCC AACTGTTAAT
GTGTTCTTAC TCGACAGTAG TATTGAAATC GAAAACAAGC TTGCCAATAT TGAGAAATCA
GAAATAACGC TACCCCTTAG TCTAAAAGCC AAATAG
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| Protein sequence | MTFGQKFSLL NKRIKAIIYS GIVVFLYAIS GFFILPLIVK PLIIDTVTEK LERQAQLDVI
EFNPFTLSIT LKGFSISGKH TDKLLDFDLL TVNLQAFPLL QKTISFDEII INKPEVSVII
LANGEFNFQD IILKNTALDS EVDSENTNEA AWILSIDKFR HNEGIINFSD QNRETAYHHT
IKEINVALDN FSTKAGDNNM HLVKAKTSQG TELNWHGKFS LSPLKSSGDI SFVSPLKIVS
DYLQQRILFN ITEGSLKVNS HYDFNFAGEQ PQFIINNLMA SISALEIRSR DDNKKIITSD
ELSVDLEQLS SSDKKIVINS ISNTGSFIAV NRNKLSQFDI EKLFILQQLN QSVSTDETEV
STESSTEKDE AVKHKDNKRE NWDLEIKAIS TSNNNIVIND SSVSPIAIHD VTIKSLTIEH
LKPFTDELAL LSSTIGLNTQ GIINLKGTIK PESKQLSLAL DTEQISLKDF QPYINSVANM
KILNGELATN LMIDIDAAKV TPLLNIKGDI KVSSLNVIET TLNEEFLSWE NLTLNDMQFS
YPAQRLNLSA ININEPFLRL VINEGSTTNI QQLMKVEQAD ASDSETKNSK SEVNNEVSSA
EQSFTADINE INITNGKLDF SDSSLTPKFS AGIYSLNGDI TGLSSNEDSR AKIDLKGKVD
KYAPVIIKGS VNPLSHDAFT DIDMLFNGIE LTTFTPYSGK FAGYAIDKGK LSLGLNYKLS
NNKLVAENNV TLDQLTLGEV VNSEEATSLP IKFALSLLKD SDGVIEFNLP IRGDIDNPDF
KYSSLVWGAL GNLITGIISS PFKALASLVE GDNDNLDHVI FTANSFELNE AEQGKLNSLA
KALLQRPSLY IEIRGLSSNL IDHDEMAYAK ILKQLQIAPK TLSGVLSEDE KTSLVTYYHS
LNKQTAQENP KEEPSNQVDV APTLTKEDQE LAKEKLFNEA IKFMLAETPI TDAEYLMLAK
QRALQIQKHL IETAQVPTVN VFLLDSSIEI ENKLANIEKS EITLPLSLKA K
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