Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1872 |
Symbol | |
ID | 3521587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1925109 |
End bp | 1926863 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284334 |
Product | mur ligase family protein |
Protein accession | YP_268602 |
Protein GI | 71281117 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.960352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAG AAAATATAAC ACTGAGCTTA GATGATAATC GTCGGCTGAC GGGTAGAAAT TTATTATCCG ATCAGCCTGG CGCAATCATT GATGCTTTTG TATCAGGTAT TGATAAAATT ACCGTGGTAA ATGTTTGGTC AAAGTATGCT CAACAGTTAC TCAACGCCGT TAACTGGTTA GAGGATAAAA CTTTCTCTCG AATTTTCGAA GATGGAATAT CTATTGCCAT TAGCGCACCC TTAGATGCAC TTTATGCTGC GTGTGATTTG AATGAGTTAG CATGGCAGCT TACCTGTAAT GAATTAACTC AAACACCCAA TGAAGAATCA ATTTCAGCAG CAATAAGTCG TTTAAACCAA GTGATAGCTG AGGAAGTCAA TCCAGAGTTA CTTGAGTTAA TTAAGCAGTC AACGTCTAAA AATATTGTCT ATTTGGTTGA TGATGATGAA TTTTCATTGG GTTATGGTAC TACGGCACAA AGTTGGCCAA TATCAGCATT GCCTGAGGTA TCAACTATAA ACTGGTCACA ATACAAATCG ATTCCACTGG CTTATGTAAC AGGCACTAAT GGCAAATCGA CCAGTGTTCG CATTATGTCG CAAATTATCA AACAAGCGGG TAAATGTTGT GGTGTTACCT CAACCGATTT TATCCGGGTA GGCGATAATA TTATTGATCA TGGCGACTAT TCTGGTCCGG GAGGTGCAAG AATGTTATTA CGACACCCTG ATACAGAAAC CGCTATTTTA GAAGTTGCTC GGGGTGGAAT TTTACGTAGA GGATTACCGA TAGATAATGT AGATGCAGCA TTGATCACTA ATATTGCCGA GGATCACCTA GGGCAATATG GTATTAATAC TGTTTCAGCA TTGGCTCAAG CTAAAGCTGT TGTTGCTAAA GGGTTGTTAC CTAACTTAGA AGATAAAGGG CAGGAGCATA ATAGGCAAGA TAAGGGCAGG TTGGTGCTCA ATGCAGATGA TGAAAATTTA GTTGTTTTAG CGCCTGAAAT ACCCGTTACT AAGTCATGGT TTTCCTTACA TGAAGATAAT GCGACATTAC AGCAACATAA ACAAAAAGGT GGCGCTGTTT GTTTTGTTAG AGAACAACAC TTGGTTTATT CAGTCGGTAA TGAAGAGTCG GTAATCATTG CGGTTAATGA CATTCCTATG ACGCTAAACG GTGCGGCTTT GCACAATATT CAAAATGCCC TTGGCGCTAT CGCGTTAGCT AAATGTCTCA ATGTTGAGAA TGAGGCTATT AAAATAGCGC TATCAAATTT TGCCAGCAAT GTTGAGGATA ATCCCGGCAG AGGTAATCAT TTTACTGTTA AAAGTGCAGA AGTGATTATG GACTTTGCAC ATAATGTTCA TAGCATGGAA GCGATGGCTG TAACCACGGC GAACATGAAA GCACAGCGTA AATTTTTAAT GCTAAGTCAT GCGGGAGATC GAACTGACAA TGAGATCATC AATATGACTA AAACGGCATT AAAAATGAAA CCTGATTTCA TCGTTGCTGC GGAGTTAGTT CCTTATTTAC GAGGGAGAAC ATTGGGAGAA ATACCTCAGC TTATTGTAGA TACGGCGCTT GCTTATGGCA TGAAAAGAAG TGACATTTAT ATTGCAGATA GTCCTTTTAA AGGCGCAAAC TATATTGTAG AACAGTTACG AGAAAAGGAT TTAGCATTAC TGATGGTTTT ATCAGAGAGA GAAGAGATAA TCGAGCTTTT GCTTGATAAA GCTTTTTTTA GATAG
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Protein sequence | MLKENITLSL DDNRRLTGRN LLSDQPGAII DAFVSGIDKI TVVNVWSKYA QQLLNAVNWL EDKTFSRIFE DGISIAISAP LDALYAACDL NELAWQLTCN ELTQTPNEES ISAAISRLNQ VIAEEVNPEL LELIKQSTSK NIVYLVDDDE FSLGYGTTAQ SWPISALPEV STINWSQYKS IPLAYVTGTN GKSTSVRIMS QIIKQAGKCC GVTSTDFIRV GDNIIDHGDY SGPGGARMLL RHPDTETAIL EVARGGILRR GLPIDNVDAA LITNIAEDHL GQYGINTVSA LAQAKAVVAK GLLPNLEDKG QEHNRQDKGR LVLNADDENL VVLAPEIPVT KSWFSLHEDN ATLQQHKQKG GAVCFVREQH LVYSVGNEES VIIAVNDIPM TLNGAALHNI QNALGAIALA KCLNVENEAI KIALSNFASN VEDNPGRGNH FTVKSAEVIM DFAHNVHSME AMAVTTANMK AQRKFLMLSH AGDRTDNEII NMTKTALKMK PDFIVAAELV PYLRGRTLGE IPQLIVDTAL AYGMKRSDIY IADSPFKGAN YIVEQLREKD LALLMVLSER EEIIELLLDK AFFR
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