Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1867 |
Symbol | |
ID | 3520446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1917189 |
End bp | 1917953 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284329 |
Product | hypothetical protein |
Protein accession | YP_268597 |
Protein GI | 71279983 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.381737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCATAT TATTTATTGC TATCGAGCAA CACCCAAAGT ATCCCTTGAT TATTTGTGCT AATAGAGATG AGTTTCATCA ACGTCCAACG CAGGCTATGC ATGTCTGGCA AGAGTCCAAT ATCTTGGCAG GAAAAGATCT GCAAGCAGGC GGGACTTGGT TAGGTTTATC GTCAACGGGA AAATTTGCCG CATTAACTAA CTTTAGAAAA CTCCCCTTAA GTGAGGCACC TAAAAAATCT AGGGGCGATC TTGTTTTACA GGCTTTAGCC GACACTAAAA TAAACATGAC AGCTGAGTTG GCTCAGCAAG CAAGCCAATA TCACGGCTTT AACCTCATCT ATGGTTCTTT GAAGCAACTG TACTGTTATG ACAGTGTAAA TAATCAAAGT CATCAGCTTA GTGATGGAGT GCATAGCATT TGTAATGGTG CGTTAGATGA TATTTGGCCT AAAATGGCAA GAGGAGAAAA GCTGCTAAGT GAGACTATAC GTTCACAAAA AAACTTATCC ATTGAAGCCT TGTTTGATTT AATGACCAAT GACAAACAAG CTTTACCGCA TTTATTGCCT GAAACAGGCC TTGATGAGGA ATGGGAACAA CTACTCAGTG CCATTTTTAT TAAATCACCT ACCTATGGGA CACGAACAAC CACTATTATC ACGCAAGATG TCGAAGGTAA TGTTGAAACC TATGACCGTA GTTATGCGCC CTCTGGTGAG TGTATTACTA AGCAACAATT TAATTTAGCA ACGGTTTTTG ATTAA
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Protein sequence | MCILFIAIEQ HPKYPLIICA NRDEFHQRPT QAMHVWQESN ILAGKDLQAG GTWLGLSSTG KFAALTNFRK LPLSEAPKKS RGDLVLQALA DTKINMTAEL AQQASQYHGF NLIYGSLKQL YCYDSVNNQS HQLSDGVHSI CNGALDDIWP KMARGEKLLS ETIRSQKNLS IEALFDLMTN DKQALPHLLP ETGLDEEWEQ LLSAIFIKSP TYGTRTTTII TQDVEGNVET YDRSYAPSGE CITKQQFNLA TVFD
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