Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1855 |
Symbol | |
ID | 3521979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1905142 |
End bp | 1905675 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284317 |
Product | hypothetical protein |
Protein accession | YP_268585 |
Protein GI | 71281507 |
COG category | [S] Function unknown |
COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0378502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAA AGAACAAACA CCTTCGGAAA TTGCATGTCT ATTGCTCTTT AATTTGCTGT ACTTTGCTAT TAGTTTTTTC ATTGACGGGA ATTAGCTTGA ATCATCGGGT GATGTTTGAA GCAGAGCCCA AACAAAGTAC TAGTCAATAT GTCATCGAGA AGGAGGATGT GCAAAGCATT CAACTTCTCT TACGCGAATT GCCTTTAGCT TTAAATACGA AAGAACTTGA GCAGTTGATA TTGAACAAAG AGCTTTCTTT ACCCAGTCCA GGTAAAAGAC TTGAGTTATA TATCGAAGAC AAACAGTTAT TTATCGAAAG GAGTGATTTT GGTTTAGTGA GTCAACTGAA CGAGTTGCAT CAAGGTCGCT ATACTAGTAT TCGCTGGAAA ATAATTTCAG ATGTTACTGC CGTTGTCTTC ATTTTTATTG CCATTACGGG AGTTTGGTTG AGTCTGAGAG ACCATAAAAA ACGTCGAAAT TATCTTTTAT TTTTATCGTT AAGCCTAGCG ACTTTTATAT TATTAATGGA GTAA
|
Protein sequence | MKIKNKHLRK LHVYCSLICC TLLLVFSLTG ISLNHRVMFE AEPKQSTSQY VIEKEDVQSI QLLLRELPLA LNTKELEQLI LNKELSLPSP GKRLELYIED KQLFIERSDF GLVSQLNELH QGRYTSIRWK IISDVTAVVF IFIAITGVWL SLRDHKKRRN YLLFLSLSLA TFILLME
|
| |