Gene CPS_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1855 
Symbol 
ID3521979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1905142 
End bp1905675 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content36% 
IMG OID637284317 
Producthypothetical protein 
Protein accessionYP_268585 
Protein GI71281507 
COG category[S] Function unknown 
COG ID[COG3295] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0378502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AGAACAAACA CCTTCGGAAA TTGCATGTCT ATTGCTCTTT AATTTGCTGT 
ACTTTGCTAT TAGTTTTTTC ATTGACGGGA ATTAGCTTGA ATCATCGGGT GATGTTTGAA
GCAGAGCCCA AACAAAGTAC TAGTCAATAT GTCATCGAGA AGGAGGATGT GCAAAGCATT
CAACTTCTCT TACGCGAATT GCCTTTAGCT TTAAATACGA AAGAACTTGA GCAGTTGATA
TTGAACAAAG AGCTTTCTTT ACCCAGTCCA GGTAAAAGAC TTGAGTTATA TATCGAAGAC
AAACAGTTAT TTATCGAAAG GAGTGATTTT GGTTTAGTGA GTCAACTGAA CGAGTTGCAT
CAAGGTCGCT ATACTAGTAT TCGCTGGAAA ATAATTTCAG ATGTTACTGC CGTTGTCTTC
ATTTTTATTG CCATTACGGG AGTTTGGTTG AGTCTGAGAG ACCATAAAAA ACGTCGAAAT
TATCTTTTAT TTTTATCGTT AAGCCTAGCG ACTTTTATAT TATTAATGGA GTAA
 
Protein sequence
MKIKNKHLRK LHVYCSLICC TLLLVFSLTG ISLNHRVMFE AEPKQSTSQY VIEKEDVQSI 
QLLLRELPLA LNTKELEQLI LNKELSLPSP GKRLELYIED KQLFIERSDF GLVSQLNELH
QGRYTSIRWK IISDVTAVVF IFIAITGVWL SLRDHKKRRN YLLFLSLSLA TFILLME