| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1833 |
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| Symbol | torA |
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| ID | 3519518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1882307 |
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| End bp | 1884799 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284295 |
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| Product | trimethylamine-N-oxide reductase |
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| Protein accession | YP_268563 |
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| Protein GI | 71277996 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA GAAATTTTTT AAAAGGCATT TTAGCGACAT CATTTACCGT AATTAGCACT
GCTTCGGTTT TGACACCATT GACCGCTTTA GCAAAAATAG GAGCTAAAAA CCGTGACGAT
TGGCTAACAA CAGGTTCTCA TTTTGGTGCC TTTAAAATGA AACGTAAAAA TGGTGTTATT
GATCAAGTAA AACCATTTGA TTTAGATAAA TATCCAACCG ATATGATCAA CGGAATTAAA
GGCTTAGTTT ATAATCCATC ACGTATTCGC TACCCTATGG TTCGCTTAGA CTTTTTATTA
AAAGGTCATA AAAGTGATAC CAGTCAACGC GGTGATTTTC GTTTTGTTAG AGTCACTTGG
GATCAAGCAT TAACCTTGTT TAAACAATCA CTTGATGAAA TACAAACAAA TTATGGCCCC
TCTGGTTTAC ACGCAGGACA AACAGGCTGG CGTGCCACCG GGCAGTTACA CTCTTGTACT
AGCCACATGC AACGAGCTGT TGGTATGCAC GGTAATTTTG TTAAAAAAAT TGGGGATTAC
TCCACGGGTG CAGGTCAAAC AATTTTACCT TATGTTTTAG GCTCAACCGA AGTTTATGCC
CAAGGCACAT CATGGCCATT AATTTTAGAT AATGCTAAGA CAATCGTATT ATGGGCAAAC
GACCCTTATA AAAACTTACA AGTTGGCTGG AATGCTGAAA CCCATGAAAG TTTTGAATAT
CTTGCTCAGC TAAAAGAAAA AGTAAAAAAA GGTGAGATCC GCGTGATCAG CATAGATCCC
GTGGCATCAA AAACTCAAGA TTACTTAGGT TGTGAAAAAA TATATGTAAA TCCACAAACA
GATGTAGCCT TAATGCTCGC TATTGCGTAT GAGCTTTACA CCAACGACTT ACATGACAAA
GATTTCATAA AAGGTTACAG CTTAGGTTTT GAGCGCTTTG TGCCGTATTT AACGGGCGAA
GAAGATGGCA TTGCTAAAAC AGTCGAATGG GCAGAAAAAA TTACGGCTGT ACCTGCCGAC
GTAATTAAAG AACTCGCTAA AACCATGGTC GCTGGTCGTA CACAATTATT AATGGGTTGG
TGTATTCAGC GTCAGCAACA TGGTGAACAA CCTTATTGGA TGGCTGCTGT ATTAGCGACC
ATGATAGGTC AAATTGGTTT ACCTGGTGGT GGAATTAGTT ATGGTCATCA TTATTCTGGT
ATTGGTGTAC CTTCTTCTGG CGCTGCAGCA CCGGGTGCCT TTCCTCGCAA TGTAGATGAA
GGTCAAAAGC CGATATTTGA CAGCACTGAT TTTAAAGGCG CTAGTAGTAC TATTCCTGTT
GCCCGTTGGA TAGATGCGAT TTTAGAGCCG GGCAAAGTGA TTGATGCCAA TGGCGCTAAA
GTGACTTACC CTGATATTAA AATGATGATT TTCTCAGGGA ACAATCCTTG GAACCATCAT
CAAGATAGAA ACCGTATGAA AAAAGCATTT CATAAACTGG AATGTGTGGT CAGTATCGAT
ATCAACTGGA CGGCAACCTG TCGTTTCTCA GATATTGTAC TGCCAGCCTG TACTACCATG
GAAAGAAACG ATATCGATAT TTATGGTAGT TATGCCAATC GTGGCTTGCT TGCTATGCAA
AAAATGGTTG AACCATTATT TGATAGCTTA TCTGACTATG AAATATTCAC TCGCTTTGCC
AAAGTGTTAG GCAAAGAAAA AGAATATACC CGCGGTATGA ATGAGTTTGA TTGGCTAACA
AAATTATATA ATGATTGTAA AAAAGCCAAT GACGGTAAGT TTGTTATGCC TGAATTTGAG
CAATTTTGGC AAGATGGATA TGTACACTTT GGTGAAGGTA AGCCGTGGAC TCGACATGCT
GCTTTTAGAG AAGATCCTGA AATAAATCCG TTAGGCACGC CTTCTGGCAT GATTGAAATA
CACAGTAGAA AAATAGAACG TTATCAATAT GATGATTGTA AAGGCCACCC AACATGGATG
GAAAAATCAG AACGCAGTCA CGGTGGTCCT GGCTCAGATA AACACCCTAT TTGGATGCAG
TCTTGTCACC CAGACAAACG TTTGCATTCA CAAATGTGTG AATCAAAAGA ATATCGAGAT
ACTTACACGG TACAAGACAG AGAGCCGGTT TATTTAAATC CAGCAGATGC TAAGCACCGT
GGCATTAAAA ATGGCGATGT GGTGAGAGTA TTTAACGATC GAGGCCAATT ACTTGCTGGC
GCAGTGGTAA GTGCTAACTT CCCTGAAGGT GTTATTCGGA TTCATGAGGG CGCTTGGTAT
GGACCCGTTG GCGATGATGG TAGTATTACG GGTGGCGCAA AAGTGGGAGC GATTTGTAGT
TATGGCGATC CTAATACTTT AACGCAAGAT ATTGGCTCAT CTAAATTAGC TCAAGCTTGT
TCAGCCTATA CTTGTTTAGT AGATTATGAA AAGTTTAGCG GTAAATTGCC GCCAGTAACC
TCATTTCAAG GACCATTGGA GATCGGCGCA TGA
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| Protein sequence | MKRRNFLKGI LATSFTVIST ASVLTPLTAL AKIGAKNRDD WLTTGSHFGA FKMKRKNGVI
DQVKPFDLDK YPTDMINGIK GLVYNPSRIR YPMVRLDFLL KGHKSDTSQR GDFRFVRVTW
DQALTLFKQS LDEIQTNYGP SGLHAGQTGW RATGQLHSCT SHMQRAVGMH GNFVKKIGDY
STGAGQTILP YVLGSTEVYA QGTSWPLILD NAKTIVLWAN DPYKNLQVGW NAETHESFEY
LAQLKEKVKK GEIRVISIDP VASKTQDYLG CEKIYVNPQT DVALMLAIAY ELYTNDLHDK
DFIKGYSLGF ERFVPYLTGE EDGIAKTVEW AEKITAVPAD VIKELAKTMV AGRTQLLMGW
CIQRQQHGEQ PYWMAAVLAT MIGQIGLPGG GISYGHHYSG IGVPSSGAAA PGAFPRNVDE
GQKPIFDSTD FKGASSTIPV ARWIDAILEP GKVIDANGAK VTYPDIKMMI FSGNNPWNHH
QDRNRMKKAF HKLECVVSID INWTATCRFS DIVLPACTTM ERNDIDIYGS YANRGLLAMQ
KMVEPLFDSL SDYEIFTRFA KVLGKEKEYT RGMNEFDWLT KLYNDCKKAN DGKFVMPEFE
QFWQDGYVHF GEGKPWTRHA AFREDPEINP LGTPSGMIEI HSRKIERYQY DDCKGHPTWM
EKSERSHGGP GSDKHPIWMQ SCHPDKRLHS QMCESKEYRD TYTVQDREPV YLNPADAKHR
GIKNGDVVRV FNDRGQLLAG AVVSANFPEG VIRIHEGAWY GPVGDDGSIT GGAKVGAICS
YGDPNTLTQD IGSSKLAQAC SAYTCLVDYE KFSGKLPPVT SFQGPLEIGA
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