Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1828 |
Symbol | torR |
ID | 3519027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1878801 |
End bp | 1879523 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284290 |
Product | DNA-binding transcriptional regulator TorR |
Protein accession | YP_268558 |
Protein GI | 71278381 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGATA AACATATTTT AGTGGTAGAA GATGAAGCGA TAACACGAGC CAAACTGGTG GGTTATTTCC AACATGCTGG TTATCGAGTT AGTGAAGCGG AAAATAAAAG CCAAATGATG GTGGTATTGG AAAATCATCA CATTGATTTA GTCATGTTAG ACATTAACTT GCCTGATGAA GATGGCTTGA TGATCACTCG AAACCTGCGC AGCCATTCGA ACATTGGCAT TGTGCTTGTG ACCGGGAGAA CTGACTCTAT CGATAAAATT ATTGGTTTAG AAATGGGCGC TGATGATTAT GTTACTAAGC CTTTCGAGCT AAGAGAGCTG TTAGTTCGCG TTAAAAACAT TCTATGGCGC ATATCATTAA CCGAGCAAAA ATCTGTTATA GCTACAGAAG ATGAGGAAGA TGACGATTTA TTTCATTTTG GTCAATGCAG CTTTGATATT CCAAAACGAA AGTTGCTCAA AAATAATATT CCAATAAAAC TAACTAAAGC TGAATACGAT ATTTTAGTGG CTTTTGTCGC TAACCCTAGC CGAGTACTCA GCCGTGATCG ATTACTTAAT TTAATTGAGC ATAGAGTTGA TGCACCCAAT GATAGAACCA TCGATGTGCT GGTTCGTCGT TTACGTCACA AAATAGAAGA TAATCCGAAA GAGCCACAGA TTTTCACGAC GATTCATGGT GAAGGGTATT TATTCGCCGC TGATATTACC TAG
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Protein sequence | MNDKHILVVE DEAITRAKLV GYFQHAGYRV SEAENKSQMM VVLENHHIDL VMLDINLPDE DGLMITRNLR SHSNIGIVLV TGRTDSIDKI IGLEMGADDY VTKPFELREL LVRVKNILWR ISLTEQKSVI ATEDEEDDDL FHFGQCSFDI PKRKLLKNNI PIKLTKAEYD ILVAFVANPS RVLSRDRLLN LIEHRVDAPN DRTIDVLVRR LRHKIEDNPK EPQIFTTIHG EGYLFAADIT
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