| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1827 |
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| Symbol | torT |
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| ID | 3521858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1877679 |
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| End bp | 1878749 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284289 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_268557 |
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| Protein GI | 71281386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAATAC TTTTAGTGCT ACTACTCAAC ATTGTTTATT GTTTGTTTTT CTTATCAACA
GCAGTCGCAG CTAATCAAGA CCAGTTAAAT AACAATCGTG CAACGAGTAC AATAGCAGTA
AGCGAGCTAT CAACAAGTAA AGTATCCACA GGAAAAATTA AATTATGTGC GGTCTACCCT
CATCTAAAAG ATTCTTATTG GCTTAGCATC AATTTTGGCA TGACTGAACA GGCAAAACAA
AGATCAATTG AATTAAAAGT CCTAGATGCC GGAGGCTACC AGAATAAGGA TGAACAGTTA
AGACAAATTG AACAATGTAT TCATTGGCAA GCAAGCGCAA TATTAGTAGG CTCGGTTAAT
TTTGAGGCAT TAAATCAAAA ACTTGCACAA GTTAACAAGC ATACGCCAGT TTTTGCCTTA
GTAAATGAAA TAGCCACGAA CAATATTAGT GGCAGAACGG GTGTCTCTTG GTATCAAATG
GGTTATCAGT TGGGAGAATA TCTGGTTAAG CACCATCAAA ATAATTTCAA TACTACACCA
GCAACACTTG CTTGGTTTCC TGGCCCTAAA AGGGGAGGGG GCAGTTTACA ATCTACCAAA
GGTTTACAAG CCGCACTTGT GAATAGTCCT ATTGAAATAA TCGCTATCGA GCACGGCTTA
AATGAGAAGA TAACTCAGTT TTCTTTGCTC AAAGACACCT TGAAAAAATA TAATAACATC
GATTATTTAG CGGGCAATGC TGTGATGGCT GAAATGGCAA TAAATGAGGT CGGAAGGTTA
CCTAAAGAAC AACAACCTGA GATCCTAAGT CATTACCTTA GCCATGGCGT TTATCGTGGT
ATTAAGCGTC ATAAAATATT AATGGCCAAT TCAGATCAAA TGGTACTGCA AGGTAAAATG
GCCATTAACC AAGCCGTTGA TTACCTAAAA ATAGGGAAGG TGAAAACTTT GCAGGCACCT
ACAATTATCA CGATAGATCA AGCGACTATA AAAAAACTAA AGACTGAATT GTCATTGTCA
CCAAGTAACT TTAAGCCTAT TTATAGTATT AAAGCTACTG AAGTAAAATA A
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| Protein sequence | MKILLVLLLN IVYCLFFLST AVAANQDQLN NNRATSTIAV SELSTSKVST GKIKLCAVYP
HLKDSYWLSI NFGMTEQAKQ RSIELKVLDA GGYQNKDEQL RQIEQCIHWQ ASAILVGSVN
FEALNQKLAQ VNKHTPVFAL VNEIATNNIS GRTGVSWYQM GYQLGEYLVK HHQNNFNTTP
ATLAWFPGPK RGGGSLQSTK GLQAALVNSP IEIIAIEHGL NEKITQFSLL KDTLKKYNNI
DYLAGNAVMA EMAINEVGRL PKEQQPEILS HYLSHGVYRG IKRHKILMAN SDQMVLQGKM
AINQAVDYLK IGKVKTLQAP TIITIDQATI KKLKTELSLS PSNFKPIYSI KATEVK
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