Gene CPS_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1820 
Symbol 
ID3521597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1869866 
End bp1870951 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content36% 
IMG OID637284282 
Productsensor histidine kinase 
Protein accessionYP_268550 
Protein GI71281126 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTC TGAAAGCTCT GCTACATTTT TATTCCACCA TTACCGCTAA GCAGATTCTG 
ATAGGGCTTG TTTCACTTTC TATCGTCGCT TTTTTTATCA CACAAACCGC AATAGCCGAT
CGTAAAGAGT CGCTATCATG GGAACCTTGG CTTTTAGAGT ACAGCGCTGT TTATTGTTAT
GGCCTAGTTT GTCCAATCAT TATTTTTTGC TGTAAAAAGT GGTCACTAGA TGAAACGCAT
AGATATAAAT CAATGCTAAA AGTGGCGATT TTGTATATCC CATTTACCTT CCTTTTTATC
TCACTAATGA TCGGAACAAG GCATTTAGCC TATTTATTAA TTGAGGGTAG GCTTTGGGAT
AACGGTGATT TACTTACAAG GTATATCTAT GAATACCCTA AAACGATAGG CTTCTATTGT
GCCATCGTAT TCGGCGCTTA CACTAAAGTT TATTTTGAAA CATACCAAAA AGAACAAATT
CACGCTGCAA AACTCAACGA GCAATTACTC ACCGCACAAA TAGCTGTTTT AAGGAATCAA
TTACAGCCTC ATTTTTTGTT TAACACCTTG AATCTTATTT CTAGCACTAT GTATCAAGAT
GTTGATAAAG CCGATTCAAT TATTATGCGT TTAGGAAATC TACTGCGTTA TTCATTAGCT
GCAGAACAAA AGCCTTGGGT AACCTTTAAT GAAGAGTTAC AGGCTATGAC TTCATTTTTA
GAAATAGCTC AGTTACGCTT TGGTGATAGA TTATCTACAA AAATAGAAAT TGAACCACAA
GTAGAATCCG TTTTGATCCC TGCAATGTTA CTACAGCCAT TACTCGAAAA TGCCGTGAAA
TATGGTATTG AGCCTTCTGA TGATATGGGC GGAGTTCACC TTAAAGCCTA TAGTGAAGAT
GGGATGCTTT GTATTACTAT TATGAATCCA TTACTCGAAT ATGAAAACCA ACAACCTTCT
TTTGGTATTG GTTTACAAAA TACCAAAGAA AGACTCGAAC TGTTATATGG TGATTCGGCA
AACGTTTCAC TTGTTCAACA AGGTAACAAC TCCATTATAT TAACACTGAC TTTACCTATG
CAATAA
 
Protein sequence
MQTLKALLHF YSTITAKQIL IGLVSLSIVA FFITQTAIAD RKESLSWEPW LLEYSAVYCY 
GLVCPIIIFC CKKWSLDETH RYKSMLKVAI LYIPFTFLFI SLMIGTRHLA YLLIEGRLWD
NGDLLTRYIY EYPKTIGFYC AIVFGAYTKV YFETYQKEQI HAAKLNEQLL TAQIAVLRNQ
LQPHFLFNTL NLISSTMYQD VDKADSIIMR LGNLLRYSLA AEQKPWVTFN EELQAMTSFL
EIAQLRFGDR LSTKIEIEPQ VESVLIPAML LQPLLENAVK YGIEPSDDMG GVHLKAYSED
GMLCITIMNP LLEYENQQPS FGIGLQNTKE RLELLYGDSA NVSLVQQGNN SIILTLTLPM
Q